Literature DB >> 23509251

RecA acts as a switch to regulate polymerase occupancy in a moving replication fork.

Chiara Indiani1, Meghna Patel, Myron F Goodman, Mike E O'Donnell.   

Abstract

This report discovers a role of Escherichia coli RecA, the cellular recombinase, in directing the action of several DNA polymerases at the replication fork. Bulk chromosome replication is performed by DNA polymerase (Pol) III. However, E. coli contains translesion synthesis (TLS) Pols II, IV, and V that also function with the helicase, primase, and sliding clamp in the replisome. Surprisingly, we find that RecA specifically activates replisomes that contain TLS Pols. In sharp contrast, RecA severely inhibits the Pol III replisome. Given the opposite effects of RecA on Pol III and TLS replisomes, we propose that RecA acts as a switch to regulate the occupancy of polymerases within a moving replisome.

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Year:  2013        PMID: 23509251      PMCID: PMC3619308          DOI: 10.1073/pnas.1303301110

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  52 in total

Review 1.  Managing DNA polymerases: coordinating DNA replication, DNA repair, and DNA recombination.

Authors:  M D Sutton; G C Walker
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-17       Impact factor: 11.205

Review 2.  Participation of recombination proteins in rescue of arrested replication forks in UV-irradiated Escherichia coli need not involve recombination.

Authors:  J Courcelle; P C Hanawalt
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-17       Impact factor: 11.205

3.  Crystal structure of the processivity clamp loader gamma (gamma) complex of E. coli DNA polymerase III.

Authors:  D Jeruzalmi; M O'Donnell; J Kuriyan
Journal:  Cell       Date:  2001-08-24       Impact factor: 41.582

4.  DNA array analysis of gene expression in response to UV irradiation in Escherichia coli.

Authors:  Philippe Quillardet; Marie-Ange Rouffaud; Philippe Bouige
Journal:  Res Microbiol       Date:  2003-10       Impact factor: 3.992

5.  RecFOR proteins load RecA protein onto gapped DNA to accelerate DNA strand exchange: a universal step of recombinational repair.

Authors:  Katsumi Morimatsu; Stephen C Kowalczykowski
Journal:  Mol Cell       Date:  2003-05       Impact factor: 17.970

6.  Roles of chromosomal and episomal dinB genes encoding DNA pol IV in targeted and untargeted mutagenesis in Escherichia coli.

Authors:  S R Kim; K Matsui; M Yamada; P Gruz; T Nohmi
Journal:  Mol Genet Genomics       Date:  2001-10       Impact factor: 3.291

7.  Ordered ATP hydrolysis in the gamma complex clamp loader AAA+ machine.

Authors:  Aaron Johnson; Mike O'Donnell
Journal:  J Biol Chem       Date:  2003-02-10       Impact factor: 5.157

8.  All three SOS-inducible DNA polymerases (Pol II, Pol IV and Pol V) are involved in induced mutagenesis.

Authors:  R Napolitano; R Janel-Bintz; J Wagner; R P Fuchs
Journal:  EMBO J       Date:  2000-11-15       Impact factor: 11.598

9.  The active form of DNA polymerase V is UmuD'(2)C-RecA-ATP.

Authors:  Qingfei Jiang; Kiyonobu Karata; Roger Woodgate; Michael M Cox; Myron F Goodman
Journal:  Nature       Date:  2009-07-16       Impact factor: 49.962

10.  SSB protein diffusion on single-stranded DNA stimulates RecA filament formation.

Authors:  Rahul Roy; Alexander G Kozlov; Timothy M Lohman; Taekjip Ha
Journal:  Nature       Date:  2009-10-11       Impact factor: 49.962

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  21 in total

1.  Regression of replication forks stalled by leading-strand template damage: II. Regression by RecA is inhibited by SSB.

Authors:  Sankalp Gupta; Joseph T P Yeeles; Kenneth J Marians
Journal:  J Biol Chem       Date:  2014-08-19       Impact factor: 5.157

2.  Stringent response processes suppress DNA damage sensitivity caused by deficiency in full-length translation initiation factor 2 or PriA helicase.

Authors:  K Elizabeth Madison; Erica N Jones-Foster; Andrea Vogt; Sandra Kirtland Turner; Stella H North; Hiroshi Nakai
Journal:  Mol Microbiol       Date:  2014-02-28       Impact factor: 3.501

3.  Interactions and Localization of Escherichia coli Error-Prone DNA Polymerase IV after DNA Damage.

Authors:  Sarita Mallik; Ellen M Popodi; Andrew J Hanson; Patricia L Foster
Journal:  J Bacteriol       Date:  2015-06-22       Impact factor: 3.490

4.  Human PrimPol is a highly error-prone polymerase regulated by single-stranded DNA binding proteins.

Authors:  Thomas A Guilliam; Stanislaw K Jozwiakowski; Aaron Ehlinger; Ryan P Barnes; Sean G Rudd; Laura J Bailey; J Mark Skehel; Kristin A Eckert; Walter J Chazin; Aidan J Doherty
Journal:  Nucleic Acids Res       Date:  2014-12-29       Impact factor: 16.971

5.  Compartmentalization of the replication fork by single-stranded DNA-binding protein regulates translesion synthesis.

Authors:  Seungwoo Chang; Elizabeth S Thrall; Luisa Laureti; Sadie C Piatt; Vincent Pagès; Joseph J Loparo
Journal:  Nat Struct Mol Biol       Date:  2022-09-20       Impact factor: 18.361

Review 6.  Replication stress: getting back on track.

Authors:  Matteo Berti; Alessandro Vindigni
Journal:  Nat Struct Mol Biol       Date:  2016-02       Impact factor: 15.369

Review 7.  Recombination and replication.

Authors:  Aisha H Syeda; Michelle Hawkins; Peter McGlynn
Journal:  Cold Spring Harb Perspect Biol       Date:  2014-10-23       Impact factor: 10.005

8.  RecA-independent recombination: Dependence on the Escherichia coli RarA protein.

Authors:  Kanika Jain; Elizabeth A Wood; Zachary J Romero; Michael M Cox
Journal:  Mol Microbiol       Date:  2020-12-19       Impact factor: 3.979

9.  Recombinase and translesion DNA polymerase decrease the speed of replication fork progression during the DNA damage response in Escherichia coli cells.

Authors:  Kang Wei Tan; Tuan Minh Pham; Asako Furukohri; Hisaji Maki; Masahiro Tatsumi Akiyama
Journal:  Nucleic Acids Res       Date:  2015-01-27       Impact factor: 16.971

10.  Regulation of Mutagenic DNA Polymerase V Activation in Space and Time.

Authors:  Andrew Robinson; John P McDonald; Victor E A Caldas; Meghna Patel; Elizabeth A Wood; Christiaan M Punter; Harshad Ghodke; Michael M Cox; Roger Woodgate; Myron F Goodman; Antoine M van Oijen
Journal:  PLoS Genet       Date:  2015-08-28       Impact factor: 5.917

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