| Literature DB >> 23505337 |
Thomas Gelbrich1, Doris E Braun, Arkady Ellern, Ulrich J Griesser.
Abstract
Four polymorphic forms of methyl paraben (Entities:
Year: 2013 PMID: 23505337 PMCID: PMC3594894 DOI: 10.1021/cg301639r
Source DB: PubMed Journal: Cryst Growth Des ISSN: 1528-7483 Impact factor: 4.076
Scheme 1Overview of Reports about Polymorphs of 1 and Assignment of the Forms Discussed in This Study
| report | notation | experimental method(s) | ref |
|---|---|---|---|
| SS, IR, HSM (mp 126 °C) | |||
| Kofler & Kofler, 1931 | I | OM, SS, HSM (mp 126 °C) | ( |
| Lindpaintner, 1939 | I | SS, HSM (mp 127 °C) | ( |
| Lin, 1983 | SX (RT; CSD: CEBGOF) | ( | |
| Giordano et al., 1999 | DSC (mp 126.0) | ( | |
| Vujovic & Nassimbeni, 2006 | SX (LT; CSD: CEBGOF01) | ( | |
| Fun & Jebas, 2008 | SX (LT; CSD: CEBGOF02) | ( | |
| Nath et al., 2011 | I | SS, IR | ( |
| SS, SX (RT), IR, HSM (mp 109 °C), DSC | |||
| Kofler & Kofler, 1931 | II | OM, SS, HSM (mp 110 °C) | ( |
| Lindpaintner, 1939 | III | SS, HSM (mp 110 °C) | ( |
| Nath et al., 2011 | II | SS, SX (LT; CSD: CEBGOF03), IR, HSM | ( |
| SS, SX (LT), IR, HSM (mp 107 °C) | |||
| SS, SX (RT), IR, HSM (mp 112 °C) |
HSM = hot-stage microscopy: IR = infrared spectroscopy; OM = optical microscopy; SS = sublimation studies; SX = single-crystal X-ray structure analysis; DSC = differential scanning calorimetry; RT = room temperature; LT = low temperature.
Proposed as a possible low-temperature form.
Claimed to be distinct from CEBGOF and CEBGOF01.
Nomenclature derived from the melting point.
Crystal Data for Polymorphs of 1
| polymorph | ||||
|---|---|---|---|---|
| chemical formula | C8H8O3 | C8H8O3 | C8H8O3 | C8H8O3 |
| formula mass | 152.14 | 152.14 | 152.14 | 152.14 |
| crystal system | monoclinic | monoclinic | monoclinic | monoclinic |
| space group | ||||
| no. of formula units per
unit cell, | 12 | 4 | 4 | 4 |
| 13.568(5) | 4.8980(8) | 17.517(5) | 5.9845(6) | |
| 16.959(7) | 14.698(2) | 7.2602(18) | 8.3384(6) | |
| 12.458(6) | 10.3341(16) | 6.224(2) | 14.4209(12) | |
| β/° | 130.10(3) | 98.774(4) | 107.61(3) | 96.526(9) |
| unit cell volume/Å3 | 2192.7 | 735.3(2) | 754.5(4) | 714.96(11) |
| volume per molecule/Å3 | 182.7 | 183.8 | 188.6 | 178.7 |
| temperature/K | 298 | 298(2) | 298(2) | 173(2) |
| no. of reflections measured | 4619 | 1641 | 2914 | |
| no. of independent reflections | 1299 | 893 | 1331 | |
| 0.0561 | 0.0803 | 0.0421 | ||
| final | 0.0354 | 0.0536 | 0.0489 | |
| final | 0.0577 | 0.1020 | 0.1052 | |
| final | 0.0977 | 0.0947 | 0.0786 | |
| final | 0.0637 | 0.1339 | 0.1187 | |
| reference | 4 | |||
| CSD refcode or CCDC no. | CEBGOF | 905982 | 905983 | 905984 |
The structure is the same as those of CEBGOF01 and CEBGOF02.
Figure 1(a) Isometric crystal of 1-I, surrounded by form 1-III (sublimation experiment); (b) crystals of 1-III formed by sublimation at 90 °C; (c) form 1-107 crystallized from melt droplets; (d) crystals of 1-112 formed by sublimation at 105 °C.
Figure 2IR spectra of polymorphs of 1. Reference lines a–e and the values associated with them are detailed in Table 3.
Positions (cm–1) of Distinctive Bands in the Mid Infrared Spectra of Polymorphs of 1
| polymorph | |||||
|---|---|---|---|---|---|
| section | type | ||||
| ν(O–H) | 3315 | 3264 | 3379 | 3555 | |
| ν(C=O) | 1683 | 1689 | 1690 | 1682 | |
| ν(C–O) | 1280, 1235 | 1284, 1236 | 1285, 1220 | 1288, 1219 | |
| ν(C–C–O) [in phase] | 957 | 967 | 975 | 958 | |
| ν(C–H) [banding wagging] | 772 | 772 | 775 | 780 | |
Figure 3Crystallographic and local symmetry elements in the bc-plane of 1-I (viewed along the a*-axis). (a–d) Molecules are color coded, yellow (y), blue (b), red (r), and green (g), according to their symmetry relationships: translation (y/y, b/b, r/r, g/g), glide (y/g, r/b), and inversion (y/b, r/g); local and global symmetry elements are indicated red and black, respectively; (a) single H-bonded chain; two neighboring chains related by (b) inversion (X) or (c) by translation (T); (d) X′ X T X′ X T sequence of H-bonded chains; the local symmetry elements α–ε are listed in Table 4; (e) alternative representation of the same sequence, highlighting molecule types 1 (green), 2 (gray), and 3 (pink).
Figure 4O–H···O=C bonded chains in polymorphs of 1 and the analogous N–H···O=C bonded chain of 2-II (top: cross-section).
Symmetry Operations in 1-Ia
| # | operation | position | type | molecules affected |
|---|---|---|---|---|
| α | crystallographic | complete crystal structure | ||
| β | local | 2 + 3 in a single H-bonded chain | ||
| γ | local | 2 + 3 in adjacent H-bonded chains ( | ||
| δ | inversion | 0.272, 0.165, 0.723 | local | 1 + 3
(two H-bonded chains |
| ε | inversion | 0.271, 0.166, 0.223 | local | 1 + 2 (two H-bonded chains |
See Figure 3d,e.
Figure 5Crystal structures of polymorphs of 1, viewed along their crystallographic axes. H atoms, except those in OH groups, are omitted for clarity. O–H···O=C bonds are highlighted.
Geometrical Parameters (Å, °) of O–H···O Bonds in Polymorphs of 1
| D–H···A | ∠(DHA) | |||
|---|---|---|---|---|
| O1A–H1A···O2A | 0.82 | 1.96 | 2.770(2) | 168 |
| O1B–H1B···O3C | 0.82 | 1.93 | 2.729(2) | 167 |
| O1C–H1C···O2B | 0.82 | 1.92 | 2.729(2) | 167 |
| O3–H3O···O1 | 0.83(2) | 1.87(2) | 2.693(2) | 176(3) |
| O3–H3O···O1 | 0.82(2) | 1.93(2) | 2.737(2) | 168(3) |
| O3–H3O···O1 | 0.82(9) | 2.00(9) | 2.723(7) | 148(9) |
Symmetry transformations used to generate equivalent atoms: x – 1/2, −y + 1/2, z – 1/2.
x + 1, y, z + 1.
x + 1, −y + 3/2, z – 1/2.
x – 1/2, −y + 1/2, z – 1/2.
x, y + 1, z.
Figure 6Packing relationships involving crystal structures of methyl paraben and analogous compounds (see Table 6), identified with XPac. The color scheme is the same as in Figure 3a–d.
Figure 7Details of similar packing in 1-III and 1-112 (SC D). (a) Top: assembly of two neighboring H-bonded chains with an instance of D highlighted; bottom: side view, showing the different offset. (b) Molecular packing in the (102) plane of 1-III (top) and in the (1̅04) plane of 1-112 (bottom) with different instances of D indicated by different colors.
Crystal Structures Included in the XPac Comparison (see Scheme 1)
| R1 | R2 | CSD | ref | ||
|---|---|---|---|---|---|
| CH3 | OH | RT | CEBGOF | ( | |
| CH3 | OH | RT | |||
| CH3 | OH | RT | |||
| CH3 | OH | 173 K | |||
| CH3 | NH2 | RT | CEBGUL | ( | |
| CH3 | NH2 | 120 K | CEBGUL01 | ( | |
| CH3 | C(=O)OCH3 | RT | DMTPAL | ( | |
| CH3 | Br | 173 K | DEGGOM | ( | |
| CH3 | I | RT | FORGOI | ( | |
| CH3 | CCH | 120 K | AYOHIF | ( | |
| CH3 | CH2Br | 173 K | XEZBOU | ( | |
| CH3 | CH3 | 120 K | XIYVOR | ( | |
| CH3 | C(=O)F | RT | LALXEB | ( | |
| CH2CH3 | NH2 | RT | QQQAXG04 | ( | |
| CH2CH3 | NH2 | RT | QQQAXG05 | ( | |
| CH2CH3 | NH2 | 150 K | QQQAXG03 | ( | |
| CH2CH3 | OH | RT | FEGLEI | ( | |
| CH2CHCH2 | OH | RT | ELIDEI | ( | |
| CH2CH2CH3 | OH | RT | DUPKAB | ( |
Figure 8Tree diagram according to ref (39), illustrating packing relationships between polymorphs of 1 and crystal structures of analogous compounds (Table 6). The SCs A–I are illustrated in Figures 6 and 7.
Figure 9Lattice energy differences of the four methyl paraben polymorphs. Isolated molecule charge density = relaxed structures obtained using the CrystalOptimizer methodology; molecule in polarizable continuum = relaxed structures with average polarization from the PCM model; molecule polarized by polymorph = relaxed structures with the addition of the induction energy; periodic ab initio = density functional theory relaxations with dispersion correction. PBE0 or MP2: PBE0/6-31G(d,p) or MP2/6-31 (d,p) level of theory used for calculating molecular geometry and charge density; FIT or W01: FIT or Williams01 repulsion-dispersion potential parameters; G06 or TS: Grimme or Tkatchenko and Scheffler dispersion corrections. Tie lines have been added to show the changes in relative ordering.
Figure 10(a–f) Electrostatic potential difference plots (“molecule polarized by polymorph” – “isolated molecule charge density”) around conformers of 1 on a surface defined by twice the atomic van der Waals radii[58] (with a zero radius for polar hydrogen atoms to reflect the close distances in hydrogen bonds), calculated from the distributed multipoles of the PBE0/6-31G(d,p) molecular charge densities and plotted using ORIENT.[59] The scale runs from −0.55 eV (−53.07 kJ mol–1, blue) to +0.45 eV (43.42 kJ mol–1, red). O–H···O=C intermolecular interactions indicated with dotted lines.
Figure 11Different models for the charge density around the 1-III conformer on a surface defined by twice the atomic van der Waals radii[58] (with a zero radius for polar hydrogen atoms to reflect the close distances in hydrogen bonds), calculated from the distributed multipoles of the PBE0/6-31G(d,p) molecular charge densities and plotted using ORIENT:[59] as calculated for (a) an isolated molecule; (b) a molecule in a polarized continuum; and (c) following polarization in the crystal. The scale runs from −0.95 eV (−91.66 kJ mol–1, blue) to +1.35 eV (130.26 kJ mol–1, red).