Literature DB >> 23481255

Deficiency of terminal ADP-ribose protein glycohydrolase TARG1/C6orf130 in neurodegenerative disease.

Reza Sharifi1, Rosa Morra, C Denise Appel, Michael Tallis, Barry Chioza, Gytis Jankevicius, Michael A Simpson, Ivan Matic, Ege Ozkan, Barbara Golia, Matthew J Schellenberg, Ria Weston, Jason G Williams, Marianna N Rossi, Hamid Galehdari, Juno Krahn, Alexander Wan, Richard C Trembath, Andrew H Crosby, Dragana Ahel, Ron Hay, Andreas G Ladurner, Gyula Timinszky, R Scott Williams, Ivan Ahel.   

Abstract

Adenosine diphosphate (ADP)-ribosylation is a post-translational protein modification implicated in the regulation of a range of cellular processes. A family of proteins that catalyse ADP-ribosylation reactions are the poly(ADP-ribose) (PAR) polymerases (PARPs). PARPs covalently attach an ADP-ribose nucleotide to target proteins and some PARP family members can subsequently add additional ADP-ribose units to generate a PAR chain. The hydrolysis of PAR chains is catalysed by PAR glycohydrolase (PARG). PARG is unable to cleave the mono(ADP-ribose) unit directly linked to the protein and although the enzymatic activity that catalyses this reaction has been detected in mammalian cell extracts, the protein(s) responsible remain unknown. Here, we report the homozygous mutation of the c6orf130 gene in patients with severe neurodegeneration, and identify C6orf130 as a PARP-interacting protein that removes mono(ADP-ribosyl)ation on glutamate amino acid residues in PARP-modified proteins. X-ray structures and biochemical analysis of C6orf130 suggest a mechanism of catalytic reversal involving a transient C6orf130 lysyl-(ADP-ribose) intermediate. Furthermore, depletion of C6orf130 protein in cells leads to proliferation and DNA repair defects. Collectively, our data suggest that C6orf130 enzymatic activity has a role in the turnover and recycling of protein ADP-ribosylation, and we have implicated the importance of this protein in supporting normal cellular function in humans.

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Year:  2013        PMID: 23481255      PMCID: PMC3642678          DOI: 10.1038/emboj.2013.51

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  42 in total

1.  Hydrolysis of O-acetyl-ADP-ribose isomers by ADP-ribosylhydrolase 3.

Authors:  Atsushi Kasamatsu; Motoyuki Nakao; Brian C Smith; Lindsay R Comstock; Tohru Ono; Jiro Kato; John M Denu; Joel Moss
Journal:  J Biol Chem       Date:  2011-04-17       Impact factor: 5.157

2.  Substrate-assisted catalysis by PARP10 limits its activity to mono-ADP-ribosylation.

Authors:  Henning Kleine; Elzbieta Poreba; Krzysztof Lesniewicz; Paul O Hassa; Michael O Hottiger; David W Litchfield; Brian H Shilton; Bernhard Lüscher
Journal:  Mol Cell       Date:  2008-10-10       Impact factor: 17.970

3.  Chemistry of gene silencing: the mechanism of NAD+-dependent deacetylation reactions.

Authors:  A A Sauve; I Celic; J Avalos; H Deng; J D Boeke; V L Schramm
Journal:  Biochemistry       Date:  2001-12-25       Impact factor: 3.162

4.  Protein glycation by ADP-ribose: studies of model conjugates.

Authors:  D Cervantes-Laurean; D E Minter; E L Jacobson; M K Jacobson
Journal:  Biochemistry       Date:  1993-02-16       Impact factor: 3.162

5.  ADP-ribosyl protein lyase. Purification, properties, and identification of the product.

Authors:  J Oka; K Ueda; O Hayaishi; H Komura; K Nakanishi
Journal:  J Biol Chem       Date:  1984-01-25       Impact factor: 5.157

Review 6.  New insights into the molecular and cellular functions of poly(ADP-ribose) and PARPs.

Authors:  Bryan A Gibson; W Lee Kraus
Journal:  Nat Rev Mol Cell Biol       Date:  2012-06-20       Impact factor: 94.444

7.  Structure and mechanism of a canonical poly(ADP-ribose) glycohydrolase.

Authors:  Mark S Dunstan; Eva Barkauskaite; Pierre Lafite; Claire E Knezevic; Amy Brassington; Marijan Ahel; Paul J Hergenrother; David Leys; Ivan Ahel
Journal:  Nat Commun       Date:  2012-06-06       Impact factor: 14.919

8.  BEDTools: a flexible suite of utilities for comparing genomic features.

Authors:  Aaron R Quinlan; Ira M Hall
Journal:  Bioinformatics       Date:  2010-01-28       Impact factor: 6.937

9.  Identification of the ADP-ribosylation sites in the PARP-1 automodification domain: analysis and implications.

Authors:  Zhihua Tao; Peng Gao; Hung-wen Liu
Journal:  J Am Chem Soc       Date:  2009-10-14       Impact factor: 15.419

10.  Poly(ADP-ribose)-dependent regulation of DNA repair by the chromatin remodeling enzyme ALC1.

Authors:  Dragana Ahel; Zuzana Horejsí; Nicola Wiechens; Sophie E Polo; Elisa Garcia-Wilson; Ivan Ahel; Helen Flynn; Mark Skehel; Stephen C West; Stephen P Jackson; Tom Owen-Hughes; Simon J Boulton
Journal:  Science       Date:  2009-08-06       Impact factor: 47.728

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  137 in total

1.  Comprehensive ADP-ribosylome analysis identifies tyrosine as an ADP-ribose acceptor site.

Authors:  Deena M Leslie Pedrioli; Mario Leutert; Vera Bilan; Kathrin Nowak; Kapila Gunasekera; Elena Ferrari; Ralph Imhof; Lars Malmström; Michael O Hottiger
Journal:  EMBO Rep       Date:  2018-06-28       Impact factor: 8.807

Review 2.  ADP-ribosyltransferases and poly ADP-ribosylation.

Authors:  Chao Liu; Xiaochun Yu
Journal:  Curr Protein Pept Sci       Date:  2015       Impact factor: 3.272

3.  Bi-allelic ADPRHL2 Mutations Cause Neurodegeneration with Developmental Delay, Ataxia, and Axonal Neuropathy.

Authors:  Katharina Danhauser; Bader Alhaddad; Christine Makowski; Dorota Piekutowska-Abramczuk; Steffen Syrbe; Natalia Gomez-Ospina; Melanie A Manning; Anna Kostera-Pruszczyk; Claudia Krahn-Peper; Riccardo Berutti; Reka Kovács-Nagy; Mirjana Gusic; Elisabeth Graf; Lucia Laugwitz; Michaela Röblitz; Andreas Wroblewski; Hans Hartmann; Anibh M Das; Eva Bültmann; Fang Fang; Manting Xu; Ulrich A Schatz; Daniela Karall; Herta Zellner; Edda Haberlandt; René G Feichtinger; Johannes A Mayr; Thomas Meitinger; Holger Prokisch; Tim M Strom; Rafał Płoski; Georg F Hoffmann; Maciej Pronicki; Penelope E Bonnen; Susanne Morlot; Tobias B Haack
Journal:  Am J Hum Genet       Date:  2018-10-25       Impact factor: 11.025

Review 4.  What Combined Measurements From Structures and Imaging Tell Us About DNA Damage Responses.

Authors:  Chris A Brosey; Zamal Ahmed; Susan P Lees-Miller; John A Tainer
Journal:  Methods Enzymol       Date:  2017-05-29       Impact factor: 1.600

5.  Monitoring Poly(ADP-ribosyl)glycohydrolase Activity with a Continuous Fluorescent Substrate.

Authors:  Bryon S Drown; Tomohiro Shirai; Johannes Gregor Matthias Rack; Ivan Ahel; Paul J Hergenrother
Journal:  Cell Chem Biol       Date:  2018-10-11       Impact factor: 8.116

6.  MacroH2A histone variants limit chromatin plasticity through two distinct mechanisms.

Authors:  Marek Kozlowski; David Corujo; Michael Hothorn; Iva Guberovic; Imke K Mandemaker; Charlotte Blessing; Judith Sporn; Arturo Gutierrez-Triana; Rebecca Smith; Thomas Portmann; Mathias Treier; Klaus Scheffzek; Sebastien Huet; Gyula Timinszky; Marcus Buschbeck; Andreas G Ladurner
Journal:  EMBO Rep       Date:  2018-09-03       Impact factor: 8.807

7.  Structural and functional analysis of parameters governing tankyrase-1 interaction with telomeric repeat-binding factor 1 and GDP-mannose 4,6-dehydratase.

Authors:  Travis Eisemann; Marie-France Langelier; John M Pascal
Journal:  J Biol Chem       Date:  2019-08-02       Impact factor: 5.157

8.  Structure of human ADP-ribosyl-acceptor hydrolase 3 bound to ADP-ribose reveals a conformational switch that enables specific substrate recognition.

Authors:  Yasin Pourfarjam; Jessica Ventura; Igor Kurinov; Ahra Cho; Joel Moss; In-Kwon Kim
Journal:  J Biol Chem       Date:  2018-06-15       Impact factor: 5.157

9.  Poly(ADP-ribose) glycohydrolase and poly(ADP-ribose)-interacting protein Hrp38 regulate pattern formation during Drosophila eye development.

Authors:  Yingbiao Ji; Michael Jarnik; Alexei V Tulin
Journal:  Gene       Date:  2013-05-25       Impact factor: 3.688

10.  Viral Macro Domains Reverse Protein ADP-Ribosylation.

Authors:  Changqing Li; Yannick Debing; Gytis Jankevicius; Johan Neyts; Ivan Ahel; Bruno Coutard; Bruno Canard
Journal:  J Virol       Date:  2016-09-12       Impact factor: 5.103

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