Literature DB >> 23480874

Temperature-dependent conformations of a membrane supported zinc porphyrin tweezer by 2D fluorescence spectroscopy.

Julia R Widom1, Wonbae Lee, Alejandro Perdomo-Ortiz, Dmitrij Rappoport, Tadeusz F Molinski, Alán Aspuru-Guzik, Andrew H Marcus.   

Abstract

We studied the equilibrium conformations of a zinc porphyrin tweezer composed of two carboxylphenyl-functionalized zinc tetraphenyl porphyrin subunits connected by a 1,4-butyndiol spacer, which was suspended inside the amphiphilic regions of 1,2-distearoyl-sn-glycero-3-phosphocholine (DSPC) liposomes. By combining phase-modulation two-dimensional fluorescence spectroscopy (2D FS) with linear absorbance and fluorimetry, we determined that the zinc porphyrin tweezer adopts a mixture of folded and extended conformations in the membrane. By fitting an exciton-coupling model to a series of data sets recorded over a range of temperatures (17-85 °C) and at different laser center wavelengths, we determined that the folded form of the tweezer is stabilized by a favorable change in the entropy of the local membrane environment. Our results provide insights toward understanding the balance of thermodynamic factors that govern molecular assembly in membranes.

Entities:  

Mesh:

Substances:

Year:  2013        PMID: 23480874      PMCID: PMC3723700          DOI: 10.1021/jp400394z

Source DB:  PubMed          Journal:  J Phys Chem A        ISSN: 1089-5639            Impact factor:   2.781


  25 in total

1.  Conformation of self-assembled porphyrin dimers in liposome vesicles by phase-modulation 2D fluorescence spectroscopy.

Authors:  Geoffrey A Lott; Alejandro Perdomo-Ortiz; James K Utterback; Julia R Widom; Alán Aspuru-Guzik; Andrew H Marcus
Journal:  Proc Natl Acad Sci U S A       Date:  2011-09-22       Impact factor: 11.205

2.  Two-dimensional spectroscopy of electronic couplings in photosynthesis.

Authors:  Tobias Brixner; Jens Stenger; Harsha M Vaswani; Minhaeng Cho; Robert E Blankenship; Graham R Fleming
Journal:  Nature       Date:  2005-03-31       Impact factor: 49.962

3.  Polarization-dependent optical 2D Fourier transform spectroscopy of semiconductors.

Authors:  Tianhao Zhang; Irina Kuznetsova; Torsten Meier; Xiaoqin Li; Richard P Mirin; Peter Thomas; Steven T Cundiff
Journal:  Proc Natl Acad Sci U S A       Date:  2007-07-13       Impact factor: 11.205

Review 4.  Coherent multidimensional optical spectroscopy of excitons in molecular aggregates; quasiparticle versus supermolecule perspectives.

Authors:  Darius Abramavicius; Benoit Palmieri; Dmitri V Voronine; Frantisek Sanda; Shaul Mukamel
Journal:  Chem Rev       Date:  2009-06       Impact factor: 60.622

5.  Coupling of local folding to site-specific binding of proteins to DNA.

Authors:  R S Spolar; M T Record
Journal:  Science       Date:  1994-02-11       Impact factor: 47.728

6.  Protein-DNA recognition: new perspectives and underlying themes.

Authors:  P H von Hippel
Journal:  Science       Date:  1994-02-11       Impact factor: 47.728

7.  Liposomal circular dichroism. Assignment of remote stereocenters in plakinic acids K and L from a Plakortis-Xestospongia sponge association.

Authors:  Doralyn S Dalisay; Tim Quach; Tadeusz F Molinski
Journal:  Org Lett       Date:  2010-04-02       Impact factor: 6.005

8.  Two-quantum 2D FT electronic spectroscopy of biexcitons in GaAs quantum wells.

Authors:  Katherine W Stone; Kenan Gundogdu; Daniel B Turner; Xiaoqin Li; Steven T Cundiff; Keith A Nelson
Journal:  Science       Date:  2009-05-29       Impact factor: 47.728

9.  Spectroscopic studies of position-specific DNA "breathing" fluctuations at replication forks and primer-template junctions.

Authors:  Davis Jose; Kausiki Datta; Neil P Johnson; Peter H von Hippel
Journal:  Proc Natl Acad Sci U S A       Date:  2009-02-25       Impact factor: 11.205

10.  Solution conformation of 2-aminopurine (2-AP) dinucleotide determined by ultraviolet 2D fluorescence spectroscopy (UV-2D FS).

Authors:  Julia R Widom; Neil P Johnson; Peter H von Hippel; Andrew H Marcus
Journal:  New J Phys       Date:  2013-02-01       Impact factor: 3.729

View more
  6 in total

1.  Temperature-dependent conformations of exciton-coupled Cy3 dimers in double-stranded DNA.

Authors:  Loni Kringle; Nicolas P D Sawaya; Julia Widom; Carson Adams; Michael G Raymer; Alán Aspuru-Guzik; Andrew H Marcus
Journal:  J Chem Phys       Date:  2018-02-28       Impact factor: 3.488

Review 2.  Fifty years of DNA "breathing": Reflections on old and new approaches.

Authors:  Peter H von Hippel; Neil P Johnson; Andrew H Marcus
Journal:  Biopolymers       Date:  2013-12       Impact factor: 2.505

3.  Temperature-dependent local conformations and conformational distributions of cyanine dimer labeled single-stranded-double-stranded DNA junctions by 2D fluorescence spectroscopy.

Authors:  Dylan Heussman; Justin Kittell; Peter H von Hippel; Andrew H Marcus
Journal:  J Chem Phys       Date:  2022-01-28       Impact factor: 4.304

4.  Simulating Fluorescence-Detected Two-Dimensional Electronic Spectroscopy of Multichromophoric Systems.

Authors:  Tenzin Kunsel; Vivek Tiwari; Yassel Acosta Matutes; Alastair T Gardiner; Richard J Cogdell; Jennifer P Ogilvie; Thomas L C Jansen
Journal:  J Phys Chem B       Date:  2019-01-03       Impact factor: 2.991

5.  Time resolved structural dynamics of butadiyne-linked porphyrin dimers.

Authors:  Franco V A Camargo; Christopher R Hall; Harry L Anderson; Stephen R Meech; Ismael A Heisler
Journal:  Struct Dyn       Date:  2016-01-14       Impact factor: 2.920

6.  Simple Quantum Dynamics with Thermalization.

Authors:  Thomas L C Jansen
Journal:  J Phys Chem A       Date:  2017-12-20       Impact factor: 2.781

  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.