Literature DB >> 23479746

Organohalide respiration: microbes breathing chlorinated molecules.

David Leys1, Lorenz Adrian, Hauke Smidt.   

Abstract

Bacterial respiration has taken advantage of almost every redox couple present in the environment. The reduction of organohalide compounds to release the reduced halide ion drives energy production in organohalide respiring bacteria. This process is centred around the reductive dehalogenases, an iron-sulfur and corrinoid containing family of enzymes. These enzymes, transcriptional regulators and the bacteria themselves have potential to contribute to future bioremediation solutions that address the pollution of the environment by halogenated organic compounds.

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Year:  2013        PMID: 23479746      PMCID: PMC3638457          DOI: 10.1098/rstb.2012.0316

Source DB:  PubMed          Journal:  Philos Trans R Soc Lond B Biol Sci        ISSN: 0962-8436            Impact factor:   6.237


  29 in total

Review 1.  Anaerobic microbial dehalogenation.

Authors:  Hauke Smidt; Willem M de Vos
Journal:  Annu Rev Microbiol       Date:  2004       Impact factor: 15.500

Review 2.  Microorganisms and their roles in fundamental biogeochemical cycles.

Authors:  Eugene L Madsen
Journal:  Curr Opin Biotechnol       Date:  2011-02-16       Impact factor: 9.740

3.  Heterologous expression, purification and cofactor reconstitution of the reductive dehalogenase PceA from Dehalobacter restrictus.

Authors:  Hanno Sjuts; Karl Fisher; Mark S Dunstan; Stephen E Rigby; David Leys
Journal:  Protein Expr Purif       Date:  2012-08-23       Impact factor: 1.650

Review 4.  Dioxin formation from waste incineration.

Authors:  Takayuki Shibamoto; Akio Yasuhara; Takeo Katami
Journal:  Rev Environ Contam Toxicol       Date:  2007       Impact factor: 7.563

5.  Why are chlorinated pollutants so difficult to degrade aerobically? Redox stress limits 1,3-dichloroprop-1-ene metabolism by Pseudomonas pavonaceae.

Authors:  Pablo I Nikel; Danilo Pérez-Pantoja; Víctor de Lorenzo
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2013-03-11       Impact factor: 6.237

6.  Distribution of dehalogenation activity in subseafloor sediments of the Nankai Trough subduction zone.

Authors:  Taiki Futagami; Yuki Morono; Takeshi Terada; Anna H Kaksonen; Fumio Inagaki
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2013-03-11       Impact factor: 6.237

7.  Identification of a reductive tetrachloroethene dehalogenase in Shewanella sediminis.

Authors:  Svenja T Lohner; Alfred M Spormann
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2013-03-11       Impact factor: 6.237

8.  The restricted metabolism of the obligate organohalide respiring bacterium Dehalobacter restrictus: lessons from tiered functional genomics.

Authors:  Aamani Rupakula; Thomas Kruse; Sjef Boeren; Christof Holliger; Hauke Smidt; Julien Maillard
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2013-03-11       Impact factor: 6.237

Review 9.  Anaerobic reductive dehalogenation of polychlorinated dioxins.

Authors:  Michael Bunge; Ute Lechner
Journal:  Appl Microbiol Biotechnol       Date:  2009-07-18       Impact factor: 4.813

Review 10.  Occurrence of halogenated alkaloids.

Authors:  Gordon W Gribble
Journal:  Alkaloids Chem Biol       Date:  2012
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  14 in total

1.  Identification of the hcb Gene Operon Involved in Catalyzing Aerobic Hexachlorobenzene Dechlorination in Nocardioides sp. Strain PD653.

Authors:  Koji Ito; Kazuhiro Takagi; Akio Iwasaki; Naoto Tanaka; Yu Kanesaki; Fabrice Martin-Laurent; Shizunobu Igimi
Journal:  Appl Environ Microbiol       Date:  2017-09-15       Impact factor: 4.792

2.  Functional heterologous production of reductive dehalogenases from Desulfitobacterium hafniense strains.

Authors:  Anita Mac Nelly; Marco Kai; Aleš Svatoš; Gabriele Diekert; Torsten Schubert
Journal:  Appl Environ Microbiol       Date:  2014-05-09       Impact factor: 4.792

Review 3.  The evolution of respiratory O2/NO reductases: an out-of-the-phylogenetic-box perspective.

Authors:  Anne-Lise Ducluzeau; Barbara Schoepp-Cothenet; Robert van Lis; Frauke Baymann; Michael J Russell; Wolfgang Nitschke
Journal:  J R Soc Interface       Date:  2014-09-06       Impact factor: 4.118

4.  The corrinoid cofactor of reductive dehalogenases affects dechlorination rates and extents in organohalide-respiring Dehalococcoides mccartyi.

Authors:  Jun Yan; Burcu Şimşir; Abigail T Farmer; Meng Bi; Yi Yang; Shawn R Campagna; Frank E Löffler
Journal:  ISME J       Date:  2015-11-10       Impact factor: 10.302

5.  Interspecies metabolite transfer and aggregate formation in a co-culture of Dehalococcoides and Sulfurospirillum dehalogenating tetrachloroethene to ethene.

Authors:  Stefan Kruse; Dominique Türkowsky; Jan Birkigt; Bruna Matturro; Steffi Franke; Nico Jehmlich; Martin von Bergen; Martin Westermann; Simona Rossetti; Ivonne Nijenhuis; Lorenz Adrian; Gabriele Diekert; Tobias Goris
Journal:  ISME J       Date:  2021-01-21       Impact factor: 10.302

6.  The Gibbs free energy of formation of halogenated benzenes, benzoates and phenols and their potential role as electron acceptors in anaerobic environments.

Authors:  Jan Dolfing; Igor Novak
Journal:  Biodegradation       Date:  2014-09-18       Impact factor: 3.909

7.  Functional genomics of corrinoid starvation in the organohalide-respiring bacterium Dehalobacter restrictus strain PER-K23.

Authors:  Aamani Rupakula; Yue Lu; Thomas Kruse; Sjef Boeren; Christof Holliger; Hauke Smidt; Julien Maillard
Journal:  Front Microbiol       Date:  2015-01-06       Impact factor: 5.640

8.  Reductive dehalogenase structure suggests a mechanism for B12-dependent dehalogenation.

Authors:  Karl Ap Payne; Carolina P Quezada; Karl Fisher; Mark S Dunstan; Fraser A Collins; Hanno Sjuts; Colin Levy; Sam Hay; Stephen Ej Rigby; David Leys
Journal:  Nature       Date:  2014-10-19       Impact factor: 49.962

Review 9.  Dehalogenases: From Improved Performance to Potential Microbial Dehalogenation Applications.

Authors:  Thiau-Fu Ang; Jonathan Maiangwa; Abu Bakar Salleh; Yahaya M Normi; Thean Chor Leow
Journal:  Molecules       Date:  2018-05-07       Impact factor: 4.411

Review 10.  Microbial Synthesis and Transformation of Inorganic and Organic Chlorine Compounds.

Authors:  Siavash Atashgahi; Martin G Liebensteiner; Dick B Janssen; Hauke Smidt; Alfons J M Stams; Detmer Sipkema
Journal:  Front Microbiol       Date:  2018-12-12       Impact factor: 5.640

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