Literature DB >> 23476603

2-(2-Nitro-phenyl-sulfin-yl)acetonitrile.

Sabrina Benmebarek1, Mhamed Boudraa, Sofiane Bouacida, Hocine Merazig.   

Abstract

In the title compound, C8H6N2O3S, the dihedral angle between the nitro group and the benzene ring is 6.76 (9)°. The bond-angle sum at the S atom is 308.1°. In the crystal, mol-ecules are linked by C-H⋯O hydrogen bonds to generate (010) sheets. The crystal studied was found to be a racemic twin.

Entities:  

Year:  2013        PMID: 23476603      PMCID: PMC3588422          DOI: 10.1107/S1600536813004832

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For a related structure and background to sulfoxides, see: Benmebarek et al. (2012 ▶). For related structures see: Yan (2010 ▶); Kobayashi et al. (2003 ▶).

Experimental

Crystal data

C8H6N2O3S M = 210.21 Orthorhombic, a = 5.4114 (2) Å b = 10.7602 (4) Å c = 15.1837 (5) Å V = 884.11 (5) Å3 Z = 4 Mo Kα radiation μ = 0.35 mm−1 T = 295 K 0.26 × 0.2 × 0.15 mm

Data collection

Bruker APEXII CCD diffractometer 8401 measured reflections 2348 independent reflections 2222 reflections with I > 2σ(I) R int = 0.016

Refinement

R[F 2 > 2σ(F 2)] = 0.027 wR(F 2) = 0.070 S = 1.05 2348 reflections 128 parameters H-atom parameters constrained Δρmax = 0.21 e Å−3 Δρmin = −0.18 e Å−3 Absolute structure: Flack (1983 ▶), 1379 Friedel pairs Flack parameter: 0.53 (1) Data collection: APEX2 (Bruker, 2011 ▶); cell refinement: APEX2; data reduction: APEX2; program(s) used to solve structure: SIR2002 (Burla et al., 2005 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 2012 ▶) and DIAMOND (Brandenburg & Berndt, 2001 ▶); software used to prepare material for publication: WinGX (Farrugia, 2012 ▶). Click here for additional data file. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536813004832/hb7044sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813004832/hb7044Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813004832/hb7044Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C8H6N2O3SF(000) = 432
Mr = 210.21Dx = 1.579 Mg m3
Orthorhombic, P212121Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ac 2abCell parameters from 6191 reflections
a = 5.4114 (2) Åθ = 2.7–29.1°
b = 10.7602 (4) ŵ = 0.35 mm1
c = 15.1837 (5) ÅT = 295 K
V = 884.11 (5) Å3Block, colourless
Z = 40.26 × 0.2 × 0.15 mm
Bruker APEXII CCD diffractometer2222 reflections with I > 2σ(I)
Radiation source: sealed tubeRint = 0.016
Graphite monochromatorθmax = 29.1°, θmin = 4.0°
φ and ω scansh = −6→7
8401 measured reflectionsk = −14→14
2348 independent reflectionsl = −20→20
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.027H-atom parameters constrained
wR(F2) = 0.070w = 1/[σ2(Fo2) + (0.0327P)2 + 0.2515P] where P = (Fo2 + 2Fc2)/3
S = 1.05(Δ/σ)max = 0.001
2348 reflectionsΔρmax = 0.21 e Å3
128 parametersΔρmin = −0.18 e Å3
0 restraintsAbsolute structure: Flack (1983), 1379 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: 0.53 (1)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S20.53769 (6)0.02767 (3)0.15053 (2)0.02770 (9)
O20.5137 (2)−0.06613 (11)0.22173 (7)0.0395 (3)
O110.4219 (4)0.16230 (15)−0.12118 (8)0.0678 (5)
O120.5834 (2)0.17541 (11)0.00821 (9)0.0453 (3)
N10.4351 (3)0.13166 (12)−0.04412 (9)0.0352 (3)
N8−0.0001 (3)0.12996 (17)0.28063 (10)0.0515 (4)
C10.2643 (3)0.03718 (13)−0.01153 (9)0.0263 (3)
C20.2906 (2)−0.01016 (12)0.07377 (8)0.0235 (2)
C30.1293 (3)−0.10289 (13)0.10054 (10)0.0294 (3)
H30.1443−0.1370.15660.035*
C4−0.0546 (3)−0.14513 (14)0.04407 (11)0.0357 (3)
H4−0.1622−0.20710.06280.043*
C5−0.0795 (3)−0.09610 (15)−0.03950 (11)0.0376 (3)
H5−0.2034−0.125−0.07670.045*
C60.0809 (3)−0.00355 (14)−0.06796 (9)0.0343 (3)
H60.06510.0304−0.1240.041*
C70.4040 (3)0.17220 (14)0.19493 (11)0.0341 (3)
H7A0.52250.21130.2340.041*
H7B0.37110.22920.14680.041*
C80.1763 (3)0.14879 (15)0.24274 (10)0.0330 (3)
U11U22U33U12U13U23
S20.02549 (15)0.02869 (16)0.02891 (16)0.00442 (13)−0.00081 (13)−0.00137 (13)
C10.0308 (6)0.0236 (6)0.0246 (6)0.0010 (5)0.0058 (5)0.0006 (5)
O20.0509 (7)0.0360 (5)0.0316 (5)0.0073 (5)−0.0070 (5)0.0061 (4)
C30.0344 (7)0.0242 (6)0.0296 (7)−0.0001 (5)0.0047 (6)0.0007 (5)
O120.0399 (7)0.0423 (6)0.0537 (7)−0.0116 (5)0.0041 (6)0.0087 (5)
C50.0359 (8)0.0373 (8)0.0395 (8)0.0008 (7)−0.0071 (7)−0.0108 (6)
N10.0417 (7)0.0303 (6)0.0336 (6)−0.0008 (6)0.0104 (6)0.0055 (5)
N80.0469 (10)0.0585 (9)0.0492 (8)0.0082 (8)0.0136 (8)−0.0025 (7)
C20.0249 (6)0.0216 (6)0.0241 (6)0.0019 (5)0.0024 (5)−0.0019 (5)
C40.0326 (7)0.0291 (6)0.0453 (8)−0.0061 (6)0.0045 (7)−0.0038 (6)
C60.0440 (8)0.0347 (7)0.0244 (6)0.0065 (6)−0.0034 (6)−0.0033 (5)
O110.0987 (13)0.0692 (10)0.0354 (6)−0.0252 (9)0.0125 (8)0.0169 (6)
C80.0360 (8)0.0329 (7)0.0299 (7)0.0085 (6)−0.0016 (6)−0.0045 (6)
C70.0337 (8)0.0286 (7)0.0401 (8)0.0006 (6)0.0013 (6)−0.0080 (6)
S2—O21.4846 (11)C5—C41.381 (2)
S2—C21.8197 (13)C5—C61.390 (2)
S2—C71.8429 (15)C5—H50.93
C1—C61.382 (2)N1—O111.2177 (17)
C1—C21.3989 (18)N8—C81.133 (2)
C1—N11.4606 (18)C4—H40.93
C3—C21.3867 (19)C6—H60.93
C3—C41.390 (2)C8—C71.452 (2)
C3—H30.93C7—H7A0.97
O12—N11.2235 (19)C7—H7B0.97
O2—S2—C2104.49 (6)C3—C2—S2115.83 (10)
O2—S2—C7105.84 (7)C1—C2—S2125.91 (10)
C2—S2—C797.74 (7)C5—C4—C3120.78 (15)
C6—C1—C2122.12 (13)C5—C4—H4119.6
C6—C1—N1117.72 (12)C3—C4—H4119.6
C2—C1—N1120.16 (12)C1—C6—C5118.86 (13)
C2—C3—C4120.35 (13)C1—C6—H6120.6
C2—C3—H3119.8C5—C6—H6120.6
C4—C3—H3119.8N8—C8—C7179.36 (19)
C4—C5—C6119.90 (15)C8—C7—S2111.69 (11)
C4—C5—H5120C8—C7—H7A109.3
C6—C5—H5120S2—C7—H7A109.3
O11—N1—O12123.94 (15)C8—C7—H7B109.3
O11—N1—C1118.48 (15)S2—C7—H7B109.3
O12—N1—C1117.58 (12)H7A—C7—H7B107.9
C3—C2—C1117.97 (13)
C6—C1—N1—O11−6.2 (2)C7—S2—C2—C3−102.58 (11)
C2—C1—N1—O11173.11 (15)O2—S2—C2—C1−167.63 (11)
C6—C1—N1—O12173.76 (14)C7—S2—C2—C183.73 (12)
C2—C1—N1—O12−7.0 (2)C6—C5—C4—C30.1 (2)
C4—C3—C2—C1−1.0 (2)C2—C3—C4—C50.2 (2)
C4—C3—C2—S2−175.24 (11)C2—C1—C6—C5−1.2 (2)
C6—C1—C2—C31.5 (2)N1—C1—C6—C5178.08 (13)
N1—C1—C2—C3−177.73 (12)C4—C5—C6—C10.3 (2)
C6—C1—C2—S2175.08 (11)O2—S2—C7—C8−42.69 (13)
N1—C1—C2—S2−4.16 (18)C2—S2—C7—C864.82 (12)
O2—S2—C2—C36.06 (12)
D—H···AD—HH···AD···AD—H···A
C6—H6···O2i0.932.413.3198 (18)165
C7—H7A···O2ii0.972.503.1190 (19)122
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C6—H6⋯O2i 0.932.413.3198 (18)165
C7—H7A⋯O2ii 0.972.503.1190 (19)122

Symmetry codes: (i) ; (ii) .

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