Literature DB >> 23476583

3-Amino-1-phenyl-1H-benzo[f]chromene-2-carbonitrile.

Mehmet Akkurt1, Alan R Kennedy, Shaaban Kamel Mohamed, Sabry H H Younes, Gary J Miller.   

Abstract

In the title compound, C20H14N2O, the phenyl ring is almost normal to the naphthalene ring system with a dihedral angle of 86.72 (9)°. The 4H-pyran ring fused with the naphthalene ring system has a boat conformation. In the crystal, mol-ecules are linked into a helical supra-molecular chain along the b axis via N-H⋯N hydrogen bonds. The chains are consolidated into a three-dimensional architecture by C-H⋯π inter-actions.

Entities:  

Year:  2013        PMID: 23476583      PMCID: PMC3588429          DOI: 10.1107/S1600536813004376

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For biological and industrial applications of chromene compounds, see, for example: Ellis & Lockhart (2007 ▶); Horton et al. (2003 ▶). For puckering parameters, see: Cremer & Pople (1975 ▶). For the graph-set analysis of hydrogen bonding, see: Bernstein et al. (1995 ▶).

Experimental

Crystal data

C20H14N2O M = 298.33 Monoclinic, a = 9.4059 (8) Å b = 6.5009 (5) Å c = 12.4919 (10) Å β = 105.914 (9)° V = 734.57 (11) Å3 Z = 2 Mo Kα radiation μ = 0.09 mm−1 T = 123 K 0.30 × 0.12 × 0.07 mm

Data collection

Oxford Diffraction Xcalibur Eos diffractometer Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2010 ▶) T min = 0.955, T max = 1.000 3674 measured reflections 2780 independent reflections 2477 reflections with I > 2σ(I) R int = 0.019

Refinement

R[F 2 > 2σ(F 2)] = 0.042 wR(F 2) = 0.091 S = 1.06 2780 reflections 217 parameters 49 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.22 e Å−3 Δρmin = −0.18 e Å−3 Data collection: CrysAlis PRO (Oxford Diffraction, 2010 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶); software used to prepare material for publication: WinGX (Farrugia, 2012 ▶) and PLATON (Spek, 2009 ▶). Click here for additional data file. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536813004376/tk5198sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813004376/tk5198Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813004376/tk5198Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C20H14N2OF(000) = 312
Mr = 298.33Dx = 1.349 Mg m3
Monoclinic, P21Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ybCell parameters from 1797 reflections
a = 9.4059 (8) Åθ = 3.1–28.7°
b = 6.5009 (5) ŵ = 0.09 mm1
c = 12.4919 (10) ÅT = 123 K
β = 105.914 (9)°Rod, colourless
V = 734.57 (11) Å30.30 × 0.12 × 0.07 mm
Z = 2
Oxford Diffraction Xcalibur Eos diffractometer2780 independent reflections
Radiation source: fine-focus sealed tube2477 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.019
Detector resolution: 16.0727 pixels mm-1θmax = 28.8°, θmin = 3.2°
ω scansh = −12→10
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2010)k = −7→8
Tmin = 0.955, Tmax = 1.000l = −16→16
3674 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.042Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.091H atoms treated by a mixture of independent and constrained refinement
S = 1.06w = 1/[σ2(Fo2) + (0.0342P)2 + 0.0595P] where P = (Fo2 + 2Fc2)/3
2780 reflections(Δ/σ)max = 0.001
217 parametersΔρmax = 0.22 e Å3
49 restraintsΔρmin = −0.18 e Å3
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement on F2 for ALL reflections except those flagged by the user for potential systematic errors. Weighted R-factors wR and all goodnesses of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The observed criterion of F2 > σ(F2) is used only for calculating -R-factor-obs etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.91532 (15)0.1653 (2)0.28251 (11)0.0225 (4)
N11.0215 (2)0.2373 (3)0.14856 (16)0.0243 (6)
N20.9541 (2)0.7742 (3)0.08334 (15)0.0294 (6)
C10.9372 (2)0.3114 (3)0.21116 (15)0.0192 (6)
C20.8832 (2)0.5038 (3)0.21023 (16)0.0188 (6)
C30.7813 (2)0.5686 (3)0.28021 (16)0.0173 (6)
C40.7940 (2)0.4143 (3)0.37246 (15)0.0166 (6)
C50.7408 (2)0.4592 (3)0.46701 (16)0.0178 (6)
C60.6672 (2)0.6459 (4)0.47667 (16)0.0207 (6)
C70.6185 (2)0.6844 (4)0.56872 (17)0.0252 (7)
C80.6400 (2)0.5410 (3)0.65490 (17)0.0273 (7)
C90.7100 (2)0.3578 (4)0.64841 (17)0.0246 (7)
C100.7613 (2)0.3129 (3)0.55449 (16)0.0197 (6)
C110.8330 (2)0.1247 (3)0.54667 (16)0.0213 (6)
C120.8812 (2)0.0815 (3)0.45537 (16)0.0197 (6)
C130.8601 (2)0.2280 (3)0.37026 (16)0.0183 (6)
C140.6240 (2)0.6022 (3)0.20788 (15)0.0201 (6)
C150.5843 (2)0.7921 (4)0.15674 (16)0.0275 (7)
C160.4429 (3)0.8218 (4)0.08696 (18)0.0357 (8)
C170.3403 (3)0.6645 (5)0.06874 (18)0.0398 (9)
C180.3793 (3)0.4760 (5)0.11953 (19)0.0368 (8)
C190.5205 (2)0.4453 (4)0.18836 (17)0.0271 (7)
C200.9215 (2)0.6514 (4)0.13967 (16)0.0209 (6)
H1N1.024 (3)0.297 (4)0.084 (2)0.038 (7)*
H2N1.032 (3)0.104 (5)0.146 (2)0.043 (8)*
H30.818200.703400.315600.0210*
H60.651400.745200.418800.0250*
H70.569500.810300.573900.0300*
H80.606200.570300.718300.0330*
H90.723900.260700.707200.0290*
H110.847800.027300.605400.0260*
H120.92820−0.045800.449700.0240*
H150.654000.901400.169600.0330*
H160.416600.951000.051600.0430*
H170.243500.685700.021500.0480*
H180.309100.367400.107200.0440*
H190.546700.315100.222600.0330*
U11U22U33U12U13U23
O10.0282 (8)0.0207 (8)0.0215 (7)0.0020 (7)0.0116 (6)0.0011 (7)
N10.0270 (10)0.0260 (12)0.0227 (9)0.0022 (8)0.0118 (8)0.0002 (9)
N20.0353 (11)0.0279 (11)0.0302 (10)0.0016 (9)0.0179 (9)0.0030 (9)
C10.0177 (10)0.0237 (12)0.0151 (9)−0.0048 (9)0.0028 (8)−0.0008 (9)
C20.0183 (10)0.0216 (11)0.0169 (9)−0.0027 (8)0.0054 (8)0.0008 (9)
C30.0177 (10)0.0169 (11)0.0179 (9)−0.0023 (8)0.0059 (7)−0.0017 (9)
C40.0142 (10)0.0180 (11)0.0161 (9)−0.0032 (8)0.0019 (7)0.0004 (9)
C50.0126 (9)0.0225 (11)0.0178 (9)−0.0037 (8)0.0034 (8)0.0000 (9)
C60.0187 (10)0.0226 (11)0.0209 (9)−0.0015 (9)0.0057 (8)0.0018 (10)
C70.0224 (11)0.0260 (13)0.0292 (11)0.0004 (9)0.0105 (9)−0.0024 (10)
C80.0269 (12)0.0371 (15)0.0207 (10)−0.0030 (10)0.0114 (9)−0.0025 (10)
C90.0242 (11)0.0305 (13)0.0192 (10)−0.0030 (10)0.0063 (8)0.0029 (10)
C100.0169 (10)0.0248 (12)0.0164 (9)−0.0023 (9)0.0030 (8)0.0003 (9)
C110.0218 (11)0.0224 (12)0.0178 (10)−0.0025 (9)0.0020 (8)0.0026 (10)
C120.0174 (10)0.0180 (11)0.0217 (10)−0.0002 (9)0.0019 (8)0.0013 (10)
C130.0185 (10)0.0211 (12)0.0152 (9)−0.0033 (8)0.0047 (8)−0.0034 (9)
C140.0212 (10)0.0269 (12)0.0131 (9)0.0041 (9)0.0061 (8)0.0011 (9)
C150.0292 (12)0.0301 (13)0.0238 (10)0.0070 (10)0.0085 (9)0.0055 (11)
C160.0358 (13)0.0479 (16)0.0227 (11)0.0204 (12)0.0069 (10)0.0096 (12)
C170.0227 (12)0.073 (2)0.0219 (11)0.0134 (13)0.0033 (9)0.0024 (14)
C180.0208 (11)0.0592 (17)0.0291 (12)−0.0029 (12)0.0046 (9)−0.0022 (13)
C190.0231 (11)0.0346 (14)0.0226 (10)−0.0019 (10)0.0044 (9)−0.0003 (11)
C200.0223 (10)0.0235 (11)0.0181 (9)0.0019 (9)0.0077 (8)−0.0035 (10)
O1—C11.356 (2)C11—C121.367 (3)
O1—C131.396 (2)C12—C131.400 (3)
N1—C11.346 (3)C14—C191.385 (3)
N2—C201.160 (3)C14—C151.393 (3)
N1—H1N0.90 (3)C15—C161.389 (3)
N1—H2N0.87 (3)C16—C171.381 (4)
C1—C21.349 (3)C17—C181.382 (4)
C2—C201.415 (3)C18—C191.385 (3)
C2—C31.523 (3)C3—H31.0000
C3—C41.508 (3)C6—H60.9500
C3—C141.523 (3)C7—H70.9500
C4—C131.365 (3)C8—H80.9500
C4—C51.433 (3)C9—H90.9500
C5—C101.421 (3)C11—H110.9500
C5—C61.419 (3)C12—H120.9500
C6—C71.372 (3)C15—H150.9500
C7—C81.396 (3)C16—H160.9500
C8—C91.374 (3)C17—H170.9500
C9—C101.416 (3)C18—H180.9500
C10—C111.413 (3)C19—H190.9500
C1—O1—C13117.88 (15)C15—C14—C19119.01 (18)
H1N—N1—H2N111 (2)C14—C15—C16120.1 (2)
C1—N1—H1N122.0 (17)C15—C16—C17120.4 (2)
C1—N1—H2N117.8 (18)C16—C17—C18119.7 (2)
O1—C1—C2122.03 (17)C17—C18—C19120.1 (3)
O1—C1—N1110.54 (17)C14—C19—C18120.8 (2)
N1—C1—C2127.39 (19)N2—C20—C2178.9 (2)
C1—C2—C3123.11 (17)C2—C3—H3107.00
C1—C2—C20118.34 (19)C4—C3—H3107.00
C3—C2—C20118.54 (18)C14—C3—H3107.00
C2—C3—C14111.16 (16)C5—C6—H6120.00
C4—C3—C14114.16 (16)C7—C6—H6120.00
C2—C3—C4108.92 (16)C6—C7—H7120.00
C3—C4—C13121.06 (17)C8—C7—H7120.00
C3—C4—C5121.46 (17)C7—C8—H8120.00
C5—C4—C13117.46 (17)C9—C8—H8120.00
C4—C5—C6122.21 (18)C8—C9—H9120.00
C4—C5—C10119.53 (17)C10—C9—H9120.00
C6—C5—C10118.26 (18)C10—C11—H11120.00
C5—C6—C7120.7 (2)C12—C11—H11120.00
C6—C7—C8120.9 (2)C11—C12—H12121.00
C7—C8—C9120.24 (19)C13—C12—H12121.00
C8—C9—C10120.4 (2)C14—C15—H15120.00
C5—C10—C9119.60 (19)C16—C15—H15120.00
C5—C10—C11119.53 (17)C15—C16—H16120.00
C9—C10—C11120.88 (19)C17—C16—H16120.00
C10—C11—C12120.61 (18)C16—C17—H17120.00
C11—C12—C13118.90 (18)C18—C17—H17120.00
O1—C13—C12113.06 (16)C17—C18—H18120.00
O1—C13—C4122.98 (17)C19—C18—H18120.00
C4—C13—C12123.96 (18)C14—C19—H19120.00
C3—C14—C15119.59 (17)C18—C19—H19120.00
C3—C14—C19121.37 (18)
C13—O1—C1—N1165.54 (17)C5—C4—C13—O1179.45 (17)
C13—O1—C1—C2−12.3 (3)C5—C4—C13—C12−1.3 (3)
C1—O1—C13—C416.6 (3)C4—C5—C6—C7−179.59 (19)
C1—O1—C13—C12−162.72 (17)C10—C5—C6—C70.6 (3)
O1—C1—C2—C3−6.1 (3)C4—C5—C10—C9179.43 (18)
O1—C1—C2—C20174.79 (17)C4—C5—C10—C11−0.4 (3)
N1—C1—C2—C3176.45 (19)C6—C5—C10—C9−0.8 (3)
N1—C1—C2—C20−2.6 (3)C6—C5—C10—C11179.40 (18)
C1—C2—C3—C418.5 (3)C5—C6—C7—C8−0.1 (3)
C1—C2—C3—C14−108.1 (2)C6—C7—C8—C9−0.3 (3)
C20—C2—C3—C4−162.42 (17)C7—C8—C9—C100.2 (3)
C20—C2—C3—C1471.0 (2)C8—C9—C10—C50.4 (3)
C2—C3—C4—C5164.30 (17)C8—C9—C10—C11−179.78 (19)
C2—C3—C4—C13−14.1 (3)C5—C10—C11—C12−0.7 (3)
C14—C3—C4—C5−70.8 (2)C9—C10—C11—C12179.46 (19)
C14—C3—C4—C13110.8 (2)C10—C11—C12—C130.8 (3)
C2—C3—C14—C15−85.4 (2)C11—C12—C13—O1179.53 (17)
C2—C3—C14—C1992.2 (2)C11—C12—C13—C40.2 (3)
C4—C3—C14—C15150.88 (18)C3—C14—C15—C16177.37 (19)
C4—C3—C14—C19−31.5 (3)C19—C14—C15—C16−0.3 (3)
C3—C4—C5—C63.1 (3)C3—C14—C19—C18−177.9 (2)
C3—C4—C5—C10−177.07 (18)C15—C14—C19—C18−0.3 (3)
C13—C4—C5—C6−178.44 (19)C14—C15—C16—C170.7 (3)
C13—C4—C5—C101.4 (3)C15—C16—C17—C18−0.6 (4)
C3—C4—C13—O1−2.1 (3)C16—C17—C18—C190.1 (4)
C3—C4—C13—C12177.14 (18)C17—C18—C19—C140.4 (4)
D—H···AD—HH···AD···AD—H···A
N1—H1N···N2i0.90 (3)2.16 (2)2.978 (3)150 (2)
N1—H2N···N2ii0.87 (3)2.33 (3)3.138 (3)154 (2)
C7—H7···Cg3iii0.952.843.561 (2)133
C12—H12···Cg2iv0.952.683.446 (2)139
Table 1

Hydrogen-bond geometry (Å, °)

Cg2 and Cg3 are the centroids of the C4/C5/C10–C13 and C5–C10 rings, respectively.

D—H⋯A D—HH⋯A DA D—H⋯A
N1—H1N⋯N2i 0.90 (3)2.16 (2)2.978 (3)150 (2)
N1—H2N⋯N2ii 0.87 (3)2.33 (3)3.138 (3)154 (2)
C7—H7⋯Cg3iii 0.952.843.561 (2)133
C12—H12⋯Cg2iv 0.952.683.446 (2)139

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

  3 in total

Review 1.  The combinatorial synthesis of bicyclic privileged structures or privileged substructures.

Authors:  Douglas A Horton; Gregory T Bourne; Mark L Smythe
Journal:  Chem Rev       Date:  2003-03       Impact factor: 60.622

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  3 in total
  3 in total

1.  Crystal structure of 2-amino-4-phenyl-4H-benzo[h]chromene-3-carbo-nitrile.

Authors:  Shaaban K Mohamed; Peter N Horton; Mehmet Akkurt; Sabry H H Younes; Mustafa R Albayati
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2015-06-27

2.  Crystal structure of 3-amino-1-(4-meth-oxy-phen-yl)-1H-benzo[f]chromene-2-carbo-nitrile.

Authors:  Shaaban K Mohamed; Peter N Horton; Mehmet Akkurt; Sabry H H Younes; Mustafa R Albayati
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2015-06-13

3.  Crystal structure of 3-amino-1-(4-chloro-phen-yl)-1H-benzo[f]chromene-2-carbo-nitrile.

Authors:  Mehmet Akkurt; Peter N Horton; Shaaban K Mohamed; Sabry H H Younes; Mustafa R Albayati
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2015-06-13
  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.