Literature DB >> 23476179

(1S,3R,8R)-2,2-Dibromo-3,7,7,10-tetra-methyltricyclo-[6.4.0.0(1,3)]dodec-9-en-11-one.

Abdelouahd Oukhrib1, Ahmed Benharref, Mohamed Saadi, Lahcen El Ammari, Moha Berraho.   

Abstract

The title compound, C16H22Br2O, was synthesized from β-himachalene (3,5,5,9-tetra-methyl-2,4a,5,6,7,8-hexa-hydro-1H-benzocyclo-heptene), which was isolated from the essential oil of the Atlas cedar (Cedrus Atlantica). The mol-ecule is built up from fused six- and seven-membered rings and an additional three-membered ring from the reaction of himachalene with dibromo-carbene. The six-membered ring has an envelope conformation, with the C atom belonging to the three-membered ring forming the flap, whereas the seven-membered ring displays a screw-boat conformation; the dihedral angle between the rings (all atoms) is 60.92 (16)°.

Entities:  

Year:  2012        PMID: 23476179      PMCID: PMC3588943          DOI: 10.1107/S1600536812046089

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the isolation of β-himachalene, see: Joseph & Dev (1968 ▶); Plattier & Teiseire (1974 ▶). For the reactivity of this sesquiterpene, see: Lassaba et al. (1997 ▶); Chekroun et al. (2000 ▶); El Jamili et al. (2002 ▶); Sbai et al. (2002 ▶); Dakir et al. (2004 ▶). For its biological activity, see: Daoubi et al. (2004 ▶). For conformational analysis, see: Cremer & Pople (1975 ▶).

Experimental

Crystal data

C16H22Br2O M = 390.16 Orthorhombic, a = 6.7369 (1) Å b = 14.7635 (3) Å c = 16.3543 (3) Å V = 1626.60 (5) Å3 Z = 4 Mo Kα radiation μ = 4.98 mm−1 T = 298 K 0.80 × 0.65 × 0.25 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2003 ▶) T min = 0.259, T max = 0.746 11891 measured reflections 3330 independent reflections 2939 reflections with I > 2σ(I) R int = 0.028

Refinement

R[F 2 > 2σ(F 2)] = 0.030 wR(F 2) = 0.074 S = 1.06 3330 reflections 176 parameters H-atom parameters constrained Δρmax = 0.68 e Å−3 Δρmin = −0.37 e Å−3 Absolute structure: Flack (1983) ▶, 1397 Friedel pairs Flack parameter: 0.021 (12) Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶); software used to prepare material for publication: WinGX (Farrugia, 2012 ▶). Click here for additional data file. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812046089/go2074sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812046089/go2074Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536812046089/go2074Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H22Br2OF(000) = 784
Mr = 390.16Dx = 1.593 Mg m3
Orthorhombic, P212121Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ac 2abCell parameters from 11891 reflections
a = 6.7369 (1) Åθ = 2.8–26.4°
b = 14.7635 (3) ŵ = 4.98 mm1
c = 16.3543 (3) ÅT = 298 K
V = 1626.60 (5) Å3Prism, colourless
Z = 40.80 × 0.65 × 0.25 mm
Bruker APEXII CCD diffractometer3330 independent reflections
Radiation source: fine-focus sealed tube2939 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.028
ω and φ scansθmax = 26.4°, θmin = 2.9°
Absorption correction: multi-scan (SADABS; Sheldrick, 2003)h = −7→8
Tmin = 0.259, Tmax = 0.746k = −18→18
11891 measured reflectionsl = −20→20
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.030H-atom parameters constrained
wR(F2) = 0.074w = 1/[σ2(Fo2) + (0.034P)2 + 0.368P] where P = (Fo2 + 2Fc2)/3
S = 1.06(Δ/σ)max = 0.001
3330 reflectionsΔρmax = 0.68 e Å3
176 parametersΔρmin = −0.37 e Å3
0 restraintsAbsolute structure: Flack (1983), 1397 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: 0.021 (12)
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.7886 (4)0.8949 (2)0.72986 (18)0.0345 (7)
C20.7652 (4)0.8664 (2)0.8186 (2)0.0381 (7)
C30.8277 (5)0.9620 (2)0.79993 (18)0.0381 (7)
C40.6771 (5)1.0379 (2)0.8104 (2)0.0458 (8)
H4A0.70111.06810.86210.055*
H4B0.54491.01200.81240.055*
C50.6854 (6)1.1078 (2)0.7417 (2)0.0545 (9)
H5A0.55801.13830.73920.065*
H5B0.78421.15290.75600.065*
C60.7335 (7)1.0720 (3)0.6570 (3)0.0635 (11)
H6A0.87041.05160.65780.076*
H6B0.72701.12280.61950.076*
C70.6078 (5)0.9950 (2)0.62020 (19)0.0411 (7)
C80.6031 (4)0.9087 (2)0.67808 (18)0.0353 (7)
H80.49270.91770.71630.042*
C90.5589 (4)0.8232 (2)0.63150 (19)0.0417 (7)
H90.42860.81420.61450.050*
C100.6912 (5)0.7587 (2)0.61230 (18)0.0391 (7)
C110.9012 (4)0.7704 (2)0.63421 (19)0.0399 (7)
C120.9602 (4)0.8536 (2)0.68244 (19)0.0420 (7)
H12A1.01300.89860.64510.050*
H12B1.06490.83740.72040.050*
C131.0396 (5)0.9900 (3)0.8188 (2)0.0537 (9)
H13A1.12850.94180.80420.081*
H13B1.05201.00260.87620.081*
H13C1.07241.04340.78810.081*
C140.3936 (7)1.0248 (3)0.6061 (3)0.0832 (15)
H14A0.39171.07600.56990.125*
H14B0.33451.04130.65740.125*
H14C0.32000.97590.58210.125*
C150.6966 (8)0.9745 (3)0.5362 (3)0.0758 (13)
H15A0.83550.96150.54190.114*
H15B0.67961.02610.50110.114*
H15C0.63040.92310.51280.114*
C160.6372 (7)0.6755 (2)0.5647 (2)0.0584 (10)
H16A0.49810.67680.55200.088*
H16B0.66620.62260.59670.088*
H16C0.71260.67380.51490.088*
Br10.50492 (5)0.83972 (3)0.86363 (2)0.05453 (12)
Br20.94858 (5)0.78265 (3)0.86827 (3)0.06271 (13)
O1.0289 (4)0.71769 (17)0.61207 (15)0.0604 (6)
U11U22U33U12U13U23
C10.0291 (15)0.0354 (17)0.0390 (16)0.0008 (13)0.0031 (12)−0.0040 (14)
C20.0293 (14)0.0415 (18)0.0434 (17)0.0048 (12)0.0006 (12)−0.0004 (15)
C30.0355 (15)0.0398 (17)0.0391 (16)−0.0008 (14)0.0006 (13)−0.0075 (14)
C40.0517 (19)0.0401 (18)0.0456 (18)0.0045 (16)0.0033 (15)−0.0135 (16)
C50.070 (2)0.0361 (19)0.057 (2)0.0011 (18)−0.0057 (19)−0.0068 (18)
C60.078 (3)0.045 (2)0.067 (3)−0.006 (2)−0.003 (2)0.002 (2)
C70.0458 (16)0.0382 (16)0.0393 (17)−0.0022 (14)−0.0020 (14)0.0005 (15)
C80.0297 (14)0.0371 (17)0.0393 (15)−0.0010 (13)0.0013 (12)−0.0028 (14)
C90.0397 (14)0.0435 (17)0.0419 (16)−0.0081 (13)−0.0024 (15)−0.0010 (16)
C100.0522 (18)0.0337 (16)0.0316 (15)−0.0068 (14)0.0025 (13)0.0004 (13)
C110.0483 (16)0.0338 (16)0.0376 (15)0.0066 (14)0.0120 (15)0.0031 (15)
C120.0323 (15)0.0471 (18)0.0465 (17)0.0037 (14)0.0048 (13)−0.0093 (15)
C130.0470 (19)0.058 (2)0.0559 (19)−0.0065 (18)−0.0019 (16)−0.0152 (18)
C140.069 (3)0.079 (3)0.102 (4)0.008 (2)−0.009 (2)0.042 (3)
C150.095 (3)0.072 (3)0.061 (2)−0.010 (3)0.012 (2)0.009 (2)
C160.086 (3)0.037 (2)0.052 (2)−0.009 (2)−0.0035 (19)0.0003 (17)
Br10.04425 (17)0.0613 (2)0.0581 (2)−0.00202 (17)0.01213 (17)0.00965 (18)
Br20.0559 (2)0.0613 (2)0.0710 (2)0.01579 (18)−0.00973 (19)0.0117 (2)
O0.0663 (16)0.0493 (14)0.0657 (14)0.0148 (14)0.0091 (13)−0.0101 (12)
C1—C21.518 (4)C8—H80.9800
C1—C121.520 (4)C9—C101.341 (5)
C1—C81.524 (4)C9—H90.9300
C1—C31.537 (4)C10—C111.470 (4)
C2—C31.503 (5)C10—C161.499 (5)
C2—Br21.928 (3)C11—O1.216 (4)
C2—Br11.943 (3)C11—C121.512 (5)
C3—C131.518 (4)C12—H12A0.9700
C3—C41.522 (5)C12—H12B0.9700
C4—C51.526 (5)C13—H13A0.9600
C4—H4A0.9700C13—H13B0.9600
C4—H4B0.9700C13—H13C0.9600
C5—C61.517 (5)C14—H14A0.9600
C5—H5A0.9700C14—H14B0.9600
C5—H5B0.9700C14—H14C0.9600
C6—C71.541 (5)C15—H15A0.9600
C6—H6A0.9700C15—H15B0.9600
C6—H6B0.9700C15—H15C0.9600
C7—C141.526 (5)C16—H16A0.9600
C7—C151.529 (5)C16—H16B0.9600
C7—C81.587 (5)C16—H16C0.9600
C8—C91.505 (4)
C2—C1—C12117.1 (3)C1—C8—C7115.0 (2)
C2—C1—C8118.9 (2)C9—C8—H8106.6
C12—C1—C8113.2 (2)C1—C8—H8106.6
C2—C1—C358.9 (2)C7—C8—H8106.6
C12—C1—C3120.6 (3)C10—C9—C8125.7 (3)
C8—C1—C3117.9 (3)C10—C9—H9117.2
C3—C2—C161.1 (2)C8—C9—H9117.2
C3—C2—Br2120.5 (2)C9—C10—C11119.9 (3)
C1—C2—Br2120.9 (2)C9—C10—C16122.8 (3)
C3—C2—Br1121.3 (2)C11—C10—C16117.2 (3)
C1—C2—Br1120.8 (2)O—C11—C10122.2 (3)
Br2—C2—Br1106.75 (16)O—C11—C12119.3 (3)
C2—C3—C13118.5 (3)C10—C11—C12118.4 (3)
C2—C3—C4118.8 (3)C11—C12—C1113.1 (3)
C13—C3—C4113.8 (3)C11—C12—H12A109.0
C2—C3—C159.9 (2)C1—C12—H12A109.0
C13—C3—C1119.3 (3)C11—C12—H12B109.0
C4—C3—C1116.4 (3)C1—C12—H12B109.0
C3—C4—C5113.0 (3)H12A—C12—H12B107.8
C3—C4—H4A109.0C3—C13—H13A109.5
C5—C4—H4A109.0C3—C13—H13B109.5
C3—C4—H4B109.0H13A—C13—H13B109.5
C5—C4—H4B109.0C3—C13—H13C109.5
H4A—C4—H4B107.8H13A—C13—H13C109.5
C6—C5—C4116.4 (3)H13B—C13—H13C109.5
C6—C5—H5A108.2C7—C14—H14A109.5
C4—C5—H5A108.2C7—C14—H14B109.5
C6—C5—H5B108.2H14A—C14—H14B109.5
C4—C5—H5B108.2C7—C14—H14C109.5
H5A—C5—H5B107.4H14A—C14—H14C109.5
C5—C6—C7119.8 (4)H14B—C14—H14C109.5
C5—C6—H6A107.4C7—C15—H15A109.5
C7—C6—H6A107.4C7—C15—H15B109.5
C5—C6—H6B107.4H15A—C15—H15B109.5
C7—C6—H6B107.4C7—C15—H15C109.5
H6A—C6—H6B106.9H15A—C15—H15C109.5
C14—C7—C15106.9 (3)H15B—C15—H15C109.5
C14—C7—C6111.5 (3)C10—C16—H16A109.5
C15—C7—C6106.4 (3)C10—C16—H16B109.5
C14—C7—C8107.6 (3)H16A—C16—H16B109.5
C15—C7—C8112.7 (3)C10—C16—H16C109.5
C6—C7—C8111.7 (3)H16A—C16—H16C109.5
C9—C8—C1109.3 (3)H16B—C16—H16C109.5
C9—C8—C7112.1 (2)
  4 in total

1.  Regio- and stereoselectivity of beta-himachalene epoxidation by m-CPBA. A theoretical study.

Authors:  A Chekroun; A Jarid; A Benharref; A Boutalib
Journal:  J Org Chem       Date:  2000-07-14       Impact factor: 4.354

2.  Screening study for potential lead compounds for natural product-based fungicides: I. Synthesis and in vitro evaluation of coumarins against Botrytis cinerea.

Authors:  Mourad Daoubi; Rosa Durán-Patrón; Mohamed Hmamouchi; Rosario Hernández-Galán; Ahmed Benharref; Isidro G Collado
Journal:  Pest Manag Sci       Date:  2004-09       Impact factor: 4.845

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

4.  (1S,3R,8S,9S,10R)-2,2-Dichloro-9,10-epoxy-3,7,7,10-tetramethyltricyclo[6.4.0.0(1,3)]dodecane and (1S,3R,8S,10R)-2,2-dichloro-3,7,7,10-tetramethyltricyclo[6.4.0.0(1,3)]dodecan-9-one.

Authors:  F Sbai; M Dakir; A Auhmani; H El Jamili; M Akssira; A Benharref; A Kenz; M Pierrot
Journal:  Acta Crystallogr C       Date:  2002-07-31       Impact factor: 1.172

  4 in total

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