Literature DB >> 23456476

The critical roles of information and nonequilibrium thermodynamics in evolution of living systems.

Robert A Gatenby1, B Roy Frieden.   

Abstract

Living cells are spatially bounded, low entropy systems that, although far from thermodynamic equilibrium, have persisted for billions of years. Schrödinger, Prigogine, and others explored the physical principles of living systems primarily in terms of the thermodynamics of order, energy, and entropy. This provided valuable insights, but not a comprehensive model. We propose the first principles of living systems must include: (1) Information dynamics, which permits conversion of energy to order through synthesis of specific and reproducible, structurally-ordered components; and (2) Nonequilibrium thermodynamics, which generate Darwinian forces that optimize the system.Living systems are fundamentally unstable because they exist far from thermodynamic equilibrium, but this apparently precarious state allows critical response that includes: (1) Feedback so that loss of order due to environmental perturbations generate information that initiates a corresponding response to restore baseline state. (2) Death due to a return to thermodynamic equilibrium to rapidly eliminate systems that cannot maintain order in local conditions. (3) Mitosis that rewards very successful systems, even when they attain order that is too high to be sustainable by environmental energy, by dividing so that each daughter cell has a much smaller energy requirement. Thus, nonequilibrium thermodynamics are ultimately responsible for Darwinian forces that optimize system dynamics, conferring robustness sufficient to allow continuous existence of living systems over billions of years.

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Year:  2013        PMID: 23456476      PMCID: PMC4073208          DOI: 10.1007/s11538-013-9821-x

Source DB:  PubMed          Journal:  Bull Math Biol        ISSN: 0092-8240            Impact factor:   1.758


  12 in total

1.  Structures of modified eEF2 80S ribosome complexes reveal the role of GTP hydrolysis in translocation.

Authors:  Derek J Taylor; Jakob Nilsson; A Rod Merrill; Gregers Rom Andersen; Poul Nissen; Joachim Frank
Journal:  EMBO J       Date:  2007-04-19       Impact factor: 11.598

2.  "Nanosized voltmeter" enables cellular-wide electric field mapping.

Authors:  Katherine M Tyner; Raoul Kopelman; Martin A Philbert
Journal:  Biophys J       Date:  2007-05-18       Impact factor: 4.033

3.  Informed Generation: physical origin and biological evolution of genetic codescript interpreters.

Authors:  Peter R Wills
Journal:  J Theor Biol       Date:  2009-01-04       Impact factor: 2.691

Review 4.  GTPase-activating proteins and their complexes.

Authors:  S J Gamblin; S J Smerdon
Journal:  Curr Opin Struct Biol       Date:  1998-04       Impact factor: 6.809

5.  Quantifying system order for full and partial coarse graining.

Authors:  B Roy Frieden; Raymond J Hawkins
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2010-12-23

Review 6.  Specificity, free energy and information content in protein-DNA interactions.

Authors:  G D Stormo; D S Fields
Journal:  Trends Biochem Sci       Date:  1998-03       Impact factor: 13.807

7.  Order in a multidimensional system.

Authors:  B Roy Frieden; Robert A Gatenby
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2011-07-19

8.  Refractometry of melanocyte cell nuclei using optical scatter images recorded by digital Fourier microscopy.

Authors:  Katrina Y T Seet; Timo A Nieminen; Andrei V Zvyagin
Journal:  J Biomed Opt       Date:  2009 Jul-Aug       Impact factor: 3.170

9.  Coulomb interactions between cytoplasmic electric fields and phosphorylated messenger proteins optimize information flow in cells.

Authors:  Robert A Gatenby; B Roy Frieden
Journal:  PLoS One       Date:  2010-08-11       Impact factor: 3.240

10.  Information dynamics in living systems: prokaryotes, eukaryotes, and cancer.

Authors:  B Roy Frieden; Robert A Gatenby
Journal:  PLoS One       Date:  2011-07-19       Impact factor: 3.240

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  8 in total

Review 1.  Cell development obeys maximum Fisher information.

Authors:  B Roy Frieden; Robert A Gatenby
Journal:  Front Biosci (Elite Ed)       Date:  2013-06-01

Review 2.  A Response to the Legitimacy of Brain Death in Islam.

Authors:  Mohamed Y Rady; Joseph L Verheijde
Journal:  J Relig Health       Date:  2016-08

3.  Origin of Cancer: An Information, Energy, and Matter Disease.

Authors:  Rainer G Hanselmann; Cornelius Welter
Journal:  Front Cell Dev Biol       Date:  2016-11-17

4.  Binary Expression Enhances Reliability of Messaging in Gene Networks.

Authors:  Leonardo R Gama; Guilherme Giovanini; Gábor Balázsi; Alexandre F Ramos
Journal:  Entropy (Basel)       Date:  2020-04-22       Impact factor: 2.524

5.  The quantum mitochondrion and optimal health.

Authors:  Alistair V W Nunn; Geoffrey W Guy; Jimmy D Bell
Journal:  Biochem Soc Trans       Date:  2016-08-15       Impact factor: 5.407

6.  Cellular information dynamics through transmembrane flow of ions.

Authors:  Robert A Gatenby; B Roy Frieden
Journal:  Sci Rep       Date:  2017-11-08       Impact factor: 4.379

7.  Ion-Based Cellular Signal Transmission, Principles of Minimum Information Loss, and Evolution by Natural Selection.

Authors:  B Roy Frieden; Robert Gatenby
Journal:  Int J Mol Sci       Date:  2019-12-18       Impact factor: 5.923

8.  Integrating genetic and nongenetic drivers of somatic evolution during carcinogenesis: The biplane model.

Authors:  Robert A Gatenby; Stanislav Avdieiev; Kenneth Y Tsai; Joel S Brown
Journal:  Evol Appl       Date:  2020-05-13       Impact factor: 5.183

  8 in total

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