| Literature DB >> 29118414 |
Robert A Gatenby1, B Roy Frieden2.
Abstract
We propose cells generate large transmembrane ion gradients to form information circuits that detect, process, and respond to environmental perturbations or signals. In this model, the specialized gates of transmembrane ion channels function as information detectors that communicate to the cell through rapid and (usually) local pulses of ions. Information in the ion "puffs" is received and processed by the cell through resulting changes in charge density and/or mobile cation (and/or anion) concentrations alter the localization and function of peripheral membrane proteins. The subsequent changes in protein binding to the membrane or activation of K+, Ca2+ or Mg2+-dependent enzymes then constitute a cellular response to the perturbation. To test this hypothesis we analyzed ion-based signal transmission as a communication channel operating with coded inputs and decoded outputs. By minimizing the Kullback-Leibler cross entropy [Formula: see text] between concentrations of the ion species inside [Formula: see text] and outside [Formula: see text] the cell membrane, we find signal transmission through transmembrane ion flow forms an optimal Shannon information channel that minimizes information loss and maximizes transmission speed. We demonstrate the ion dynamics in neuronal action potentials described by Hodgkin and Huxley (including the equations themselves) represent a special case of these general information principles.Entities:
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Year: 2017 PMID: 29118414 PMCID: PMC5678125 DOI: 10.1038/s41598-017-15182-2
Source DB: PubMed Journal: Sci Rep ISSN: 2045-2322 Impact factor: 4.379
Figure 1Summary of ion-based information dynamics around the cell membrane (A). Baseline state. The initial conditions of the cell membrane produced through energy-dependent ion pumps. Concentrations of Na+ and Cl− are much higher in the extracellular space (left) than in the intracellular space (right) and vice versa for K+. Eukaryotic cells can use up to 40% of their energy budget to produce ion gradients. Specific transmembrane ion channels are present with their gates closed, thus allowing limited ion flow along concentration gradients. Peripheral membrane proteins included structural elements that support the membrane (proteins A) and enzymes (proteins B). Negative charges on enzymes (proteins B) are shielded by K+ ions causing the enzyme to be inactive. At the inner leaflet of the cell membrane primarily K+ ions shield proteins from the negative chargers of the membrane. As a result the positively charged protein A cannot bind. Note that K+ ions are about twice the volume of Na+ ions. In our model, this subtle difference is posited to be sufficient to alter the shape of the active site and, therefore the activity of some enzymes (as shown in enzyme B). (B) Ion flux due to perturbation. An external cue causes the gate in the K+ channel to open such that K+ ions flow along concentration gradients out of the cell. This results in decreased shielding of the negative charges in the inner membrane leaflet so that positive charges on protein A can form electrostatic bonds. The binding of the structural protein to the lipid membrane stabilizes it as a response to the perturbation. Further, loss of K+ ions causes the enzyme (protein B) to change in both position and shape so that it binds to its substrate to catalyze the reaction S → P1 + P2. Note that biological enzymes can increase the reaction rate by as much as 15 orders of magnitude allowing the response to be both local and rapid. (C) Ion-Flux Induces response to perturbation. Activation of the enzyme B results in rapid increase in the local concentrations of the reaction products P1 and P2. In this model, P2 blocks the actions of the perturbation closing the gate on the K channel. The other product, P1, opens the Na channel allowing rapid flow of cations, which restore the shielding on the inner leaf of the cell membrane, displacing the A proteins from the inner leaflet of the cell membrane back into the cytoplasm.