Literature DB >> 23425924

Tissue specific expression profile of Mediator genes in Arabidopsis.

Richa Pasrija1, Jitendra K Thakur.   

Abstract

Mediator is a gigantic multiprotein complex required for transcription of almost all the protein coding genes. In this report, we have analyzed the transcript abundance of 31 Med genes in different tissues of Arabidopsis. Our analysis revealed the tissue specific differential expression profile of many Med subunit genes suggesting they might be contributing in the formation, maturation or function of that specific tissue. Moreover, we also found increase or decrease in the expression level of several Med subunits during the same duration of specific processes (for example flowering) indicating probable enrichment of a particular arrangement of selected subunits during that process. Thus, this study suggests that not only specific Med subunits have functional relevance in specific processes, but specific arrangements of Med subunits might also play significant role in some processes in Arabidopsis or other plants.

Entities:  

Keywords:  Arabidopsis; flower; leaf; mediator; transcription

Mesh:

Substances:

Year:  2013        PMID: 23425924      PMCID: PMC3907417          DOI: 10.4161/psb.23983

Source DB:  PubMed          Journal:  Plant Signal Behav        ISSN: 1559-2316


  23 in total

1.  Structure of the yeast RNA polymerase II holoenzyme: Mediator conformation and polymerase interaction.

Authors:  Joshua A Davis; Yuichiro Takagi; Roger D Kornberg; Francisco A Asturias
Journal:  Mol Cell       Date:  2002-08       Impact factor: 17.970

Review 2.  Evidence for a mediator of RNA polymerase II transcriptional regulation conserved from yeast to man.

Authors:  Muriel Boube; Laurent Joulia; David L Cribbs; Henri-Marc Bourbon
Journal:  Cell       Date:  2002-07-26       Impact factor: 41.582

3.  A mediator required for activation of RNA polymerase II transcription in vitro.

Authors:  P M Flanagan; R J Kelleher; M H Sayre; H Tschochner; R D Kornberg
Journal:  Nature       Date:  1991-04-04       Impact factor: 49.962

4.  Dissecting the regulatory circuitry of a eukaryotic genome.

Authors:  F C Holstege; E G Jennings; J J Wyrick; T I Lee; C J Hengartner; M R Green; T R Golub; E S Lander; R A Young
Journal:  Cell       Date:  1998-11-25       Impact factor: 41.582

5.  Conserved structures of mediator and RNA polymerase II holoenzyme.

Authors:  F J Asturias; Y W Jiang; L C Myers; C M Gustafsson; R D Kornberg
Journal:  Science       Date:  1999-02-12       Impact factor: 47.728

6.  A novel mediator between activator proteins and the RNA polymerase II transcription apparatus.

Authors:  R J Kelleher; P M Flanagan; R D Kornberg
Journal:  Cell       Date:  1990-06-29       Impact factor: 41.582

7.  Analysis of differential expression of Mediator subunit genes in Arabidopsis.

Authors:  Richa Pasrija; Jitendra K Thakur
Journal:  Plant Signal Behav       Date:  2012-10-16

8.  Transcription control by E1A and MAP kinase pathway via Sur2 mediator subunit.

Authors:  Jennitte L Stevens; Greg T Cantin; Gang Wang; Andrej Shevchenko; Anna Shevchenko; Arnold J Berk
Journal:  Science       Date:  2002-04-04       Impact factor: 47.728

9.  Activation domain-mediator interactions promote transcription preinitiation complex assembly on promoter DNA.

Authors:  Greg T Cantin; Jennitte L Stevens; Arnold J Berk
Journal:  Proc Natl Acad Sci U S A       Date:  2003-09-23       Impact factor: 11.205

10.  A high resolution protein interaction map of the yeast Mediator complex.

Authors:  Benjamin Guglielmi; Nynke L van Berkum; Benjamin Klapholz; Theo Bijma; Muriel Boube; Claire Boschiero; Henri-Marc Bourbon; Frank C P Holstege; Michel Werner
Journal:  Nucleic Acids Res       Date:  2004-10-11       Impact factor: 16.971

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  7 in total

1.  Sequence and expression analyses of KIX domain proteins suggest their importance in seed development and determination of seed size in rice, and genome stability in Arabidopsis.

Authors:  Jitendra Kumar Thakur; Pinky Agarwal; Swarup Parida; Deepak Bajaj; Richa Pasrija
Journal:  Mol Genet Genomics       Date:  2013-06-12       Impact factor: 3.291

2.  KIX domain of AtMed15a, a Mediator subunit of Arabidopsis, is required for its interaction with different proteins.

Authors:  Vinay Kumar; Mohd Waseem; Nidhi Dwivedi; Sourobh Maji; Angad Kumar; Jitendra K Thakur
Journal:  Plant Signal Behav       Date:  2018-02-08

3.  MEDIATOR SUBUNIT17 integrates jasmonate and auxin signaling pathways to regulate thermomorphogenesis.

Authors:  Rekha Agrawal; Mohan Sharma; Nidhi Dwivedi; Sourobh Maji; Pallabi Thakur; Alim Junaid; Jiří Fajkus; Ashverya Laxmi; Jitendra K Thakur
Journal:  Plant Physiol       Date:  2022-08-01       Impact factor: 8.005

Review 4.  The intersection between circadian and heat-responsive regulatory networks controls plant responses to increasing temperatures.

Authors:  Kanjana Laosuntisuk; Colleen J Doherty
Journal:  Biochem Soc Trans       Date:  2022-06-30       Impact factor: 4.919

Review 5.  Molecular recognition by the KIX domain and its role in gene regulation.

Authors:  Jitendra K Thakur; Archana Yadav; Gitanjali Yadav
Journal:  Nucleic Acids Res       Date:  2013-11-18       Impact factor: 16.971

Review 6.  The Important Function of Mediator Complex in Controlling the Developmental Transitions in Plants.

Authors:  Lingjie Zhang; Changkui Guo
Journal:  Int J Mol Sci       Date:  2020-04-15       Impact factor: 5.923

Review 7.  Importance of Mediator complex in the regulation and integration of diverse signaling pathways in plants.

Authors:  Subhasis Samanta; Jitendra K Thakur
Journal:  Front Plant Sci       Date:  2015-09-17       Impact factor: 5.753

  7 in total

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