Literature DB >> 23072992

Analysis of differential expression of Mediator subunit genes in Arabidopsis.

Richa Pasrija1, Jitendra K Thakur.   

Abstract

Mediator is a conserved eukaryotic multiprotein complex required by RNA polymerase II for transcription of its target genes. Till date, there is no report explaining the signals that affect the overall concentration of individual Med subunits. In this report, we have analyzed the effect of different phytohormones and stresses on the transcript level of Med genes in Arabidopsis. Hormones like auxin and JA, and cold stress did not show significant effect. ABA moderately increased the transcript abundance of more than 70% of AtMed genes analyzed in this study. However, there was noticeable change in the transcript level of several AtMed genes in response to BR. Stresses like high light, dark and salt also caused significant change in the transcript abundance of many AtMed genes. These data reveal that different environmental cues can affect stoichiometric concentration of Med subunits by affecting the transcription of their respective genes. This may, in turn, affect the overall arrangement of functional Mediator complex. This also suggests that some subunits may have some specific functions to play in response different signals.

Entities:  

Keywords:  Med subunit; Mediator; hormones; stress; transcription

Mesh:

Substances:

Year:  2012        PMID: 23072992      PMCID: PMC3578909          DOI: 10.4161/psb.22438

Source DB:  PubMed          Journal:  Plant Signal Behav        ISSN: 1559-2316


  64 in total

1.  Microarray analysis of brassinosteroid-regulated genes in Arabidopsis.

Authors:  Hideki Goda; Yukihisa Shimada; Tadao Asami; Shozo Fujioka; Shigeo Yoshida
Journal:  Plant Physiol       Date:  2002-11       Impact factor: 8.340

2.  Structural basis of transcription activation: the CAP-alpha CTD-DNA complex.

Authors:  Brian Benoff; Huanwang Yang; Catherine L Lawson; Gary Parkinson; Jinsong Liu; Erich Blatter; Yon W Ebright; Helen M Berman; Richard H Ebright
Journal:  Science       Date:  2002-08-30       Impact factor: 47.728

3.  The activator-recruited cofactor/Mediator coactivator subunit ARC92 is a functionally important target of the VP16 transcriptional activator.

Authors:  Fajun Yang; Rosalie DeBeaumont; Sharleen Zhou; Anders M Näär
Journal:  Proc Natl Acad Sci U S A       Date:  2004-02-24       Impact factor: 11.205

4.  Mediator and p300/CBP-steroid receptor coactivator complexes have distinct roles, but function synergistically, during estrogen receptor alpha-dependent transcription with chromatin templates.

Authors:  Mari Luz Acevedo; W Lee Kraus
Journal:  Mol Cell Biol       Date:  2003-01       Impact factor: 4.272

5.  Mammalian Srb/Mediator complex is targeted by adenovirus E1A protein.

Authors:  T G Boyer; M E Martin; E Lees; R P Ricciardi; A J Berk
Journal:  Nature       Date:  1999-05-20       Impact factor: 49.962

6.  A multiprotein mediator of transcriptional activation and its interaction with the C-terminal repeat domain of RNA polymerase II.

Authors:  Y J Kim; S Björklund; Y Li; M H Sayre; R D Kornberg
Journal:  Cell       Date:  1994-05-20       Impact factor: 41.582

7.  Identity between TRAP and SMCC complexes indicates novel pathways for the function of nuclear receptors and diverse mammalian activators.

Authors:  M Ito; C X Yuan; S Malik; W Gu; J D Fondell; S Yamamura; Z Y Fu; X Zhang; J Qin; R G Roeder
Journal:  Mol Cell       Date:  1999-03       Impact factor: 17.970

8.  Introns in, introns out in plant gene families: a genomic approach of the dynamics of gene structure.

Authors:  Alain Lecharny; Nathalie Boudet; Isabelle Gy; Sébastien Aubourg; Martin Kreis
Journal:  J Struct Funct Genomics       Date:  2003

9.  Interdependency of brassinosteroid and auxin signaling in Arabidopsis.

Authors:  Jennifer L Nemhauser; Todd C Mockler; Joanne Chory
Journal:  PLoS Biol       Date:  2004-08-24       Impact factor: 8.029

10.  HUA ENHANCER3 reveals a role for a cyclin-dependent protein kinase in the specification of floral organ identity in Arabidopsis.

Authors:  Wenming Wang; Xuemei Chen
Journal:  Development       Date:  2004-06-02       Impact factor: 6.868

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  16 in total

1.  Sequence and expression analyses of KIX domain proteins suggest their importance in seed development and determination of seed size in rice, and genome stability in Arabidopsis.

Authors:  Jitendra Kumar Thakur; Pinky Agarwal; Swarup Parida; Deepak Bajaj; Richa Pasrija
Journal:  Mol Genet Genomics       Date:  2013-06-12       Impact factor: 3.291

2.  Tissue specific expression profile of Mediator genes in Arabidopsis.

Authors:  Richa Pasrija; Jitendra K Thakur
Journal:  Plant Signal Behav       Date:  2013-02-20

3.  The Mediator Complex MED15 Subunit Mediates Activation of Downstream Lipid-Related Genes by the WRINKLED1 Transcription Factor.

Authors:  Mi Jung Kim; In-Cheol Jang; Nam-Hai Chua
Journal:  Plant Physiol       Date:  2016-05-31       Impact factor: 8.340

4.  KIX domain of AtMed15a, a Mediator subunit of Arabidopsis, is required for its interaction with different proteins.

Authors:  Vinay Kumar; Mohd Waseem; Nidhi Dwivedi; Sourobh Maji; Angad Kumar; Jitendra K Thakur
Journal:  Plant Signal Behav       Date:  2018-02-08

5.  Interaction map of Arabidopsis Mediator complex expounding its topology.

Authors:  Sourobh Maji; Pradeep Dahiya; Mohd Waseem; Nidhi Dwivedi; Divya S Bhat; Tanvir H Dar; Jitendra K Thakur
Journal:  Nucleic Acids Res       Date:  2019-05-07       Impact factor: 16.971

6.  MEDIATOR SUBUNIT17 integrates jasmonate and auxin signaling pathways to regulate thermomorphogenesis.

Authors:  Rekha Agrawal; Mohan Sharma; Nidhi Dwivedi; Sourobh Maji; Pallabi Thakur; Alim Junaid; Jiří Fajkus; Ashverya Laxmi; Jitendra K Thakur
Journal:  Plant Physiol       Date:  2022-08-01       Impact factor: 8.005

Review 7.  The intersection between circadian and heat-responsive regulatory networks controls plant responses to increasing temperatures.

Authors:  Kanjana Laosuntisuk; Colleen J Doherty
Journal:  Biochem Soc Trans       Date:  2022-06-30       Impact factor: 4.919

Review 8.  The function of the Mediator complex in plant immunity.

Authors:  Chuanfu An; Zhonglin Mou
Journal:  Plant Signal Behav       Date:  2013-01-08

9.  Dedifferentiation of Arabidopsis thaliana cells is accompanied by a strong decrease in RNA polymerase II transcription activity and poly(A+) RNA and 25S rRNA eradication from the cytoplasm.

Authors:  Konrad Dełeńko; Janusz Niedojadło; Agata Łabędzka; Ewa Wiśniewska; Elżbieta Bednarska-Kozakiewicz
Journal:  Protoplasma       Date:  2014-09-24       Impact factor: 3.356

Review 10.  Importance of Mediator complex in the regulation and integration of diverse signaling pathways in plants.

Authors:  Subhasis Samanta; Jitendra K Thakur
Journal:  Front Plant Sci       Date:  2015-09-17       Impact factor: 5.753

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