Literature DB >> 23400945

The diversity of allosteric controls at the gateway to aromatic amino acid biosynthesis.

Samuel H Light1, Wayne F Anderson.   

Abstract

Present within bacteria, plants, and some lower eukaryotes 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase (DAHPS) catalyzes the first committed step in the synthesis of a number of metabolites, including the three aromatic amino acids phenylalanine, tyrosine, and tryptophan. Catalyzing the first reaction in an important biosynthetic pathway, DAHPS is situated at a critical regulatory checkpoint-at which pathway input can be efficiently modulated to respond to changes in the concentration of pathway outputs. Based on a phylogenetic classification scheme, DAHPSs have been divided into three major subtypes (Iα, Iβ, and II). These subtypes are subjected to an unusually diverse pattern of allosteric regulation, which can be used to further subdivide the enzymes. Crystal structures of most of the regulatory subclasses have been determined. When viewed collectively, these structures illustrate how distinct mechanisms of allostery are applied to a common catalytic scaffold. Here, we review structural revelations regarding DAHPS regulation and make the case that the functional difference between the three major DAHPS subtypes relates to basic distinctions in quaternary structure and mechanism of allostery.
Copyright © 2013 The Protein Society.

Entities:  

Mesh:

Substances:

Year:  2013        PMID: 23400945      PMCID: PMC3610045          DOI: 10.1002/pro.2233

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  37 in total

Review 1.  The shikimate pathway--a metabolic tree with many branches.

Authors:  R Bentley
Journal:  Crit Rev Biochem Mol Biol       Date:  1990       Impact factor: 8.250

2.  Some kinetic properties of the tryptophan-sensitive 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase from Neurospora crassa.

Authors:  G A Nimmo; J R Coggins
Journal:  Biochem J       Date:  1981-12-01       Impact factor: 3.857

3.  Purification and characterization of 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase from Streptomyces rimosus.

Authors:  F Stuart; I S Hunter
Journal:  Biochim Biophys Acta       Date:  1993-02-13

4.  Evidence for a novel class of microbial 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase in Streptomyces coelicolor A3(2), Streptomyces rimosus and Neurospora crassa.

Authors:  G E Walker; B Dunbar; I S Hunter; H G Nimmo; J R Coggins
Journal:  Microbiology       Date:  1996-08       Impact factor: 2.777

5.  Bacillus subtilis 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase revisited: resolution of two long-standing enigmas.

Authors:  Jing Wu; Galina Ya Sheflyan; Ronald W Woodard
Journal:  Biochem J       Date:  2005-09-01       Impact factor: 3.857

6.  Crystal structure of phenylalanine-regulated 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase from Escherichia coli.

Authors:  I A Shumilin; R H Kretsinger; R H Bauerle
Journal:  Structure       Date:  1999-07-15       Impact factor: 5.006

7.  Characterization of a recombinant type II 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase from Helicobacter pylori.

Authors:  Celia J Webby; Mark L Patchett; Emily J Parker
Journal:  Biochem J       Date:  2005-08-15       Impact factor: 3.857

8.  Evolution of 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase-encoding genes in the yeast Saccharomyces cerevisiae.

Authors:  Kerstin Helmstaedt; Axel Strittmatter; William N Lipscomb; Gerhard H Braus
Journal:  Proc Natl Acad Sci U S A       Date:  2005-06-29       Impact factor: 11.205

9.  Substrate ambiguity of 3-deoxy-D-manno-octulosonate 8-phosphate synthase from Neisseria gonorrhoeae in the context of its membership in a protein family containing a subset of 3-deoxy-D-arabino-heptulosonate 7-phosphate synthases.

Authors:  P S Subramaniam; G Xie; T Xia; R A Jensen
Journal:  J Bacteriol       Date:  1998-01       Impact factor: 3.490

10.  Evidence for the shikimate pathway in apicomplexan parasites.

Authors:  F Roberts; C W Roberts; J J Johnson; D E Kyle; T Krell; J R Coggins; G H Coombs; W K Milhous; S Tzipori; D J Ferguson; D Chakrabarti; R McLeod
Journal:  Nature       Date:  1998-06-25       Impact factor: 49.962

View more
  19 in total

1.  Complex Formation between Two Biosynthetic Enzymes Modifies the Allosteric Regulatory Properties of Both: AN EXAMPLE OF MOLECULAR SYMBIOSIS.

Authors:  Nicola J Blackmore; Ali Reza Nazmi; Richard D Hutton; Melissa N Webby; Edward N Baker; Geoffrey B Jameson; Emily J Parker
Journal:  J Biol Chem       Date:  2015-06-01       Impact factor: 5.157

2.  Domain cross-talk within a bifunctional enzyme provides catalytic and allosteric functionality in the biosynthesis of aromatic amino acids.

Authors:  Yu Bai; Eric J M Lang; Ali Reza Nazmi; Emily J Parker
Journal:  J Biol Chem       Date:  2019-01-22       Impact factor: 5.157

3.  Interdomain Conformational Changes Provide Allosteric Regulation en Route to Chorismate.

Authors:  Ali Reza Nazmi; Eric J M Lang; Yu Bai; Timothy M Allison; Mohamad H Othman; Santosh Panjikar; Vickery L Arcus; Emily J Parker
Journal:  J Biol Chem       Date:  2016-08-08       Impact factor: 5.157

4.  Evolving the naturally compromised chorismate mutase from Mycobacterium tuberculosis to top performance.

Authors:  Jūratė Fahrig-Kamarauskaitė; Kathrin Würth-Roderer; Helen V Thorbjørnsrud; Susanne Mailand; Ute Krengel; Peter Kast
Journal:  J Biol Chem       Date:  2020-10-09       Impact factor: 5.157

5.  Exploring modular allostery via interchangeable regulatory domains.

Authors:  Yifei Fan; Penelope J Cross; Geoffrey B Jameson; Emily J Parker
Journal:  Proc Natl Acad Sci U S A       Date:  2018-03-05       Impact factor: 11.205

6.  Hinge Twists and Population Shifts Deliver Regulated Catalysis for ATP-PRT in Histidine Biosynthesis.

Authors:  Wanting Jiao; Gerd Mittelstädt; Gert-Jan Moggré; Emily J Parker
Journal:  Biophys J       Date:  2019-04-09       Impact factor: 4.033

7.  Neisseria meningitidis expresses a single 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase that is inhibited primarily by phenylalanine.

Authors:  Penelope J Cross; Amy L Pietersma; Timothy M Allison; Sarah M Wilson-Coutts; Fiona C Cochrane; Emily J Parker
Journal:  Protein Sci       Date:  2013-06-27       Impact factor: 6.725

8.  Exploring the biocombinatorial potential of benzoxazoles: generation of novel caboxamycin derivatives.

Authors:  Armando A Losada; Carmen Méndez; José A Salas; Carlos Olano
Journal:  Microb Cell Fact       Date:  2017-05-25       Impact factor: 5.328

9.  The Functional Unit of Neisseria meningitidis 3-Deoxy-ᴅ-Arabino-Heptulosonate 7-Phosphate Synthase Is Dimeric.

Authors:  Penelope J Cross; Logan C Heyes; Shiwen Zhang; Ali Reza Nazmi; Emily J Parker
Journal:  PLoS One       Date:  2016-02-01       Impact factor: 3.240

10.  The importance of chorismate mutase in the biocontrol potential of Trichoderma parareesei.

Authors:  Esclaudys Pérez; M Belén Rubio; Rosa E Cardoza; Santiago Gutiérrez; Wagner Bettiol; Enrique Monte; Rosa Hermosa
Journal:  Front Microbiol       Date:  2015-10-27       Impact factor: 5.640

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.