Literature DB >> 23397119

CdTe quantum dots enhance feasibility of EvaGreen-based real-time PCR with decent amplification fidelity.

Fuming Sang1, Zhizhou Zhang, Zhong Xu, Xiaolei Ju, Hongyuan Wang, Shuanghua Zhang, Changlu Guo.   

Abstract

Quantitative real-time PCR (qPCR), as an important quantitative technique for nucleic acids, has been widely used in many fields including clinical diagnosis, molecular biology, and cancer research. However, non-specific amplification products are still a frequent problem in qPCR. In this study, we investigated the effects of QDs on real-time amplification based on either SYBR Green I or EvaGreen. It was found that QDs could raise the amplification sensitivity and thus enhance the efficiency using SYBR Green I detection system. In the case of EvaGreen detection systems, addition of QDs also led to a better correlation coefficient than without QDs. EvaGreen-based system gave sharper peaks for melting curves than SYBR Green I. The experiments indicated that the polymerase activity could be partially blocked by QDs at the pre-PCR temperatures, resulting in the improvement of PCR specificity. These results indicated that CdTe QDs could be used as a descent qPCR enhancer. Good amplification fidelity in QDs-facilitated qPCR was also a plus that has not been reported elsewhere.

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Year:  2013        PMID: 23397119     DOI: 10.1007/s12033-013-9650-z

Source DB:  PubMed          Journal:  Mol Biotechnol        ISSN: 1073-6085            Impact factor:   2.695


  46 in total

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3.  PCR fidelity of pfu DNA polymerase and other thermostable DNA polymerases.

Authors:  J Cline; J C Braman; H H Hogrefe
Journal:  Nucleic Acids Res       Date:  1996-09-15       Impact factor: 16.971

4.  The enhancement of PCR amplification by low molecular weight amides.

Authors:  R Chakrabarti; C E Schutt
Journal:  Nucleic Acids Res       Date:  2001-06-01       Impact factor: 16.971

5.  Gold nanoparticles for high-throughput genotyping of long-range haplotypes.

Authors:  Peng Chen; Dun Pan; Chunhai Fan; Jianhua Chen; Ke Huang; Dongfang Wang; Honglu Zhang; You Li; Guoyin Feng; Peiji Liang; Lin He; Yongyong Shi
Journal:  Nat Nanotechnol       Date:  2011-09-04       Impact factor: 39.213

6.  Enhanced specificity and efficiency of polymerase chain reactions using poly(amidoamine) dendrimers and derivatives.

Authors:  Xueyan Cao; Xiangyang Shi; Wenchao Yang; Xiaodong Zhang; Chunhai Fan; Jun Hu
Journal:  Analyst       Date:  2008-10-18       Impact factor: 4.616

7.  Detection of specific polymerase chain reaction product by utilizing the 5'----3' exonuclease activity of Thermus aquaticus DNA polymerase.

Authors:  P M Holland; R D Abramson; R Watson; D H Gelfand
Journal:  Proc Natl Acad Sci U S A       Date:  1991-08-15       Impact factor: 11.205

8.  Enhancing PCR amplification and sequencing using DNA-binding proteins.

Authors:  R Rapley
Journal:  Mol Biotechnol       Date:  1994-12       Impact factor: 2.695

9.  Enhancing the efficiency of a PCR using gold nanoparticles.

Authors:  Min Li; Yu-Cheng Lin; Chao-Chin Wu; Hsiao-Sheng Liu
Journal:  Nucleic Acids Res       Date:  2005-11-27       Impact factor: 16.971

10.  Characterization of EvaGreen and the implication of its physicochemical properties for qPCR applications.

Authors:  Fei Mao; Wai-Yee Leung; Xing Xin
Journal:  BMC Biotechnol       Date:  2007-11-09       Impact factor: 2.563

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  1 in total

1.  Spatiotemporal Regulation of Metal Ions in the Polymerase Chain Reaction.

Authors:  Xianjing Zhang; Jun Guo; Bo Song; Feng Zhang
Journal:  ACS Omega       Date:  2022-09-07
  1 in total

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