Literature DB >> 23393107

Digital pathology evaluation in the multicenter Nephrotic Syndrome Study Network (NEPTUNE).

Laura Barisoni1, Cynthia C Nast, J Charles Jennette, Jeffrey B Hodgin, Andrew M Herzenberg, Kevin V Lemley, Catherine M Conway, Jeffrey B Kopp, Matthias Kretzler, Christa Lienczewski, Carmen Avila-Casado, Serena Bagnasco, Sanjeev Sethi, John Tomaszewski, Adil H Gasim, Stephen M Hewitt.   

Abstract

Pathology consensus review for clinical trials and disease classification has historically been performed by manual light microscopy with sequential section review by study pathologists, or multi-headed microscope review. Limitations of this approach include high intra- and inter-reader variability, costs, and delays for slide mailing and consensus reviews. To improve this, the Nephrotic Syndrome Study Network (NEPTUNE) is systematically applying digital pathology review in a multicenter study using renal biopsy whole slide imaging (WSI) for observation-based data collection. Study pathology materials are acquired, scanned, uploaded, and stored in a web-based information system that is accessed through a web-browser interface. Quality control includes metadata and image quality review. Initially, digital slides are annotated, with each glomerulus identified, given a unique number, and maintained in all levels until the glomerulus disappears or sections end. The software allows viewing and annotation of multiple slide sections concurrently. Analysis utilizes "descriptors" for patterns of injury, rather than diagnoses, in renal parenchymal compartments. This multidimensional representation via WSI, allows more accurate glomerular counting and identification of all lesions in each glomerulus, with data available in a searchable database. The use of WSI brings about efficiency critical to pathology review in a clinical trial setting, including independent review by multiple pathologists, improved intraobserver and interobserver reproducibility, efficiencies and risk reduction in slide circulation and mailing, centralized management of data integrity and slide images for current or future studies, and web-based consensus meetings. The overall effect is improved incorporation of pathology review in a budget neutral approach.

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Year:  2013        PMID: 23393107      PMCID: PMC3731905          DOI: 10.2215/CJN.08370812

Source DB:  PubMed          Journal:  Clin J Am Soc Nephrol        ISSN: 1555-9041            Impact factor:   8.237


  22 in total

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4.  Pathologic classification of diabetic nephropathy.

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Journal:  J Am Soc Nephrol       Date:  2010-02-18       Impact factor: 10.121

5.  Novel quantitative method to evaluate globotriaosylceramide inclusions in renal peritubular capillaries by virtual microscopy in patients with fabry disease.

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6.  The Oxford classification of IgA nephropathy: pathology definitions, correlations, and reproducibility.

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Journal:  Kidney Int       Date:  2009-07-01       Impact factor: 10.612

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Journal:  Clin J Am Soc Nephrol       Date:  2007-04-11       Impact factor: 8.237

8.  Advances in the biology and genetics of the podocytopathies: implications for diagnosis and therapy.

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Journal:  Arch Pathol Lab Med       Date:  2009-02       Impact factor: 5.534

9.  Digital pathology evaluation of complement C4d component deposition in the kidney allograft biopsies is a useful tool to improve reproducibility of the scoring.

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Journal:  Diagn Pathol       Date:  2011-03-30       Impact factor: 2.644

10.  An electron microscope study of the glomerulus in nephrosis, glomerulonephritis, and lupus erythematosus.

Authors:  M G FARQUHAR; R L VERNIER; R A GOOD
Journal:  J Exp Med       Date:  1957-11-01       Impact factor: 14.307

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  50 in total

Review 1.  Morphology in the Digital Age: Integrating High-Resolution Description of Structural Alterations With Phenotypes and Genotypes.

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Journal:  Semin Nephrol       Date:  2015-05       Impact factor: 5.299

2.  Incorporating longitudinal biomarkers for dynamic risk prediction in the era of big data: A pseudo-observation approach.

Authors:  Lili Zhao; Susan Murray; Laura H Mariani; Wenjun Ju
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3.  Diagnosing Pathological Prognostic Factors in Retinoblastoma: Correlation between Traditional Microscopy and Digital Slides.

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Journal:  Ocul Oncol Pathol       Date:  2015-05-06

Review 4.  Defining Glomerular Disease in Mechanistic Terms: Implementing an Integrative Biology Approach in Nephrology.

Authors:  Laura H Mariani; William F Pendergraft; Matthias Kretzler
Journal:  Clin J Am Soc Nephrol       Date:  2016-09-14       Impact factor: 8.237

Review 5.  Renal biopsy-driven molecular target identification in glomerular disease.

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Review 6.  Pro: 'The usefulness of biomarkers in glomerular diseases'. The problem: moving from syndrome to mechanism--individual patient variability in disease presentation, course and response to therapy.

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Journal:  Nephrol Dial Transplant       Date:  2015-06       Impact factor: 5.992

7.  Renal SGLT mRNA expression in human health and disease: a study in two cohorts.

Authors:  Vikas Srinivasan Sridhar; Jaya Prakash N Ambinathan; Matthias Kretzler; Laura L Pyle; Petter Bjornstad; Sean Eddy; David Z Cherney; Heather N Reich
Journal:  Am J Physiol Renal Physiol       Date:  2019-09-23

8.  Integrative Genomics Identifies Novel Associations with APOL1 Risk Genotypes in Black NEPTUNE Subjects.

Authors:  Matthew G Sampson; Catherine C Robertson; Sebastian Martini; Laura H Mariani; Kevin V Lemley; Christopher E Gillies; Edgar A Otto; Jeffrey B Kopp; Anne Randolph; Virginia Vega-Warner; Felix Eichinger; Viji Nair; Debbie S Gipson; Daniel C Cattran; Duncan B Johnstone; John F O'Toole; Serena M Bagnasco; Peter X Song; Laura Barisoni; Jonathan P Troost; Matthias Kretzler; John R Sedor
Journal:  J Am Soc Nephrol       Date:  2015-07-06       Impact factor: 10.121

9.  Complete Remission in the Nephrotic Syndrome Study Network.

Authors:  Debbie S Gipson; Jonathan P Troost; Richard A Lafayette; Michelle A Hladunewich; Howard Trachtman; Crystal A Gadegbeku; John R Sedor; Lawrence B Holzman; Marva M Moxey-Mims; Kalyani Perumal; Frederick J Kaskel; Peter J Nelson; Katherine R Tuttle; Serena M Bagnasco; Marie C Hogan; Katherine M Dell; Gerald B Appel; John C Lieske; Titilayo O Ilori; Christine B Sethna; Fernando C Fervenza; Susan L Hogan; Patrick H Nachman; Avi Z Rosenberg; Larry A Greenbaum; Kevin E C Meyers; Stephen M Hewitt; Michael J Choi; Jeffrey B Kopp; Olga Zhdanova; Jeffrey B Hodgin; Duncan B Johnstone; Sharon G Adler; Carmen Avila-Casado; Alicia M Neu; Sangeeta R Hingorani; Kevin V Lemley; Cynthia C Nast; Tammy M Brady; Laura Barisoni-Thomas; Alessia Fornoni; J Charles Jennette; Daniel C Cattran; Matthew B Palmer; Keisha L Gibson; Heather N Reich; Michele H Mokrzycki; Kamalanathan K Sambandam; Gaston E Zilleruelo; Christoph Licht; Matthew G Sampson; Peter Song; Laura H Mariani; Matthias Kretzler
Journal:  Clin J Am Soc Nephrol       Date:  2015-12-10       Impact factor: 8.237

Review 10.  Digital pathology in nephrology clinical trials, research, and pathology practice.

Authors:  Laura Barisoni; Jeffrey B Hodgin
Journal:  Curr Opin Nephrol Hypertens       Date:  2017-11       Impact factor: 2.894

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