Literature DB >> 23388034

Efficient TALEN construction and evaluation methods for human cell and animal applications.

Tetsushi Sakuma1, Sayaka Hosoi, Knut Woltjen, Ken-Ichi Suzuki, Keiko Kashiwagi, Housei Wada, Hiroshi Ochiai, Tatsuo Miyamoto, Narudo Kawai, Yasunori Sasakura, Shinya Matsuura, Yasushi Okada, Atsuo Kawahara, Shigeo Hayashi, Takashi Yamamoto.   

Abstract

Transcription activator-like effector nucleases (TALENs) have recently arisen as effective tools for targeted genome engineering. Here, we report streamlined methods for the construction and evaluation of TALENs based on the 'Golden Gate TALEN and TAL Effector Kit' (Addgene). We diminished array vector requirements and increased assembly rates using six-module concatemerization. We altered the architecture of the native TALEN protein to increase nuclease activity and replaced the final destination vector with a mammalian expression/in vitro transcription vector bearing both CMV and T7 promoters. Using our methods, the whole process, from initiating construction to completing evaluation directly in mammalian cells, requires only 1 week. Furthermore, TALENs constructed in this manner may be directly applied to transfection of cultured cells or mRNA synthesis for use in animals and embryos. In this article, we show genomic modification of HEK293T cells, human induced pluripotent stem cells, Drosophila melanogaster, Danio rerio and Xenopus laevis, using custom-made TALENs constructed and evaluated with our protocol. Our methods are more time efficient compared with conventional yeast-based evaluation methods and provide a more accessible and effective protocol for the application of TALENs in various model organisms.
© 2013 The Authors Genes to Cells © 2013 by the Molecular Biology Society of Japan and Wiley Publishing Asia Pty Ltd.

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Year:  2013        PMID: 23388034     DOI: 10.1111/gtc.12037

Source DB:  PubMed          Journal:  Genes Cells        ISSN: 1356-9597            Impact factor:   1.891


  79 in total

1.  Efficient genome engineering using Platinum TALEN in potato.

Authors:  Shuhei Yasumoto; Naoyuki Umemoto; Hyoung Jae Lee; Masaru Nakayasu; Satoru Sawai; Tetsushi Sakuma; Takashi Yamamoto; Masaharu Mizutani; Kazuki Saito; Toshiya Muranaka
Journal:  Plant Biotechnol (Tokyo)       Date:  2019-09-25       Impact factor: 1.133

2.  Maternal and Zygotic Sphingosine Kinase 2 Are Indispensable for Cardiac Development in Zebrafish.

Authors:  Yu Hisano; Asuka Inoue; Michiyo Okudaira; Kiyohito Taimatsu; Hirotaka Matsumoto; Hirohito Kotani; Rie Ohga; Junken Aoki; Atsuo Kawahara
Journal:  J Biol Chem       Date:  2015-04-23       Impact factor: 5.157

3.  Proteomic profiling of cardiac tissue by isolation of nuclei tagged in specific cell types (INTACT).

Authors:  Nirav M Amin; Todd M Greco; Lauren M Kuchenbrod; Maggie M Rigney; Mei-I Chung; John B Wallingford; Ileana M Cristea; Frank L Conlon
Journal:  Development       Date:  2014-02       Impact factor: 6.868

Review 4.  Applications of TALENs and CRISPR/Cas9 in human cells and their potentials for gene therapy.

Authors:  Jingwen Niu; Bin Zhang; Hu Chen
Journal:  Mol Biotechnol       Date:  2014-08       Impact factor: 2.695

5.  Quadruple zebrafish mutant reveals different roles of Mesp genes in somite segmentation between mouse and zebrafish.

Authors:  Taijiro Yabe; Kazuyuki Hoshijima; Takashi Yamamoto; Shinji Takada
Journal:  Development       Date:  2016-07-06       Impact factor: 6.868

Review 6.  Targeted genome engineering techniques in Drosophila.

Authors:  Kelly J Beumer; Dana Carroll
Journal:  Methods       Date:  2014-01-08       Impact factor: 3.608

7.  Homeolog-specific targeted mutagenesis in Xenopus laevis using TALENs.

Authors:  Shota Nakade; Tetsushi Sakuma; Yuto Sakane; Yoshihiro Hara; Atsushi Kurabayashi; Keiko Kashiwagi; Akihiko Kashiwagi; Takashi Yamamoto; Masanobu Obara
Journal:  In Vitro Cell Dev Biol Anim       Date:  2015-04-29       Impact factor: 2.416

8.  Efficient targeted mutagenesis in medaka using custom-designed transcription activator-like effector nucleases.

Authors:  Satoshi Ansai; Tetsushi Sakuma; Takashi Yamamoto; Hiroyoshi Ariga; Norihito Uemura; Ryosuke Takahashi; Masato Kinoshita
Journal:  Genetics       Date:  2013-01-03       Impact factor: 4.562

9.  iPCS Cell Modeling of Inherited Cardiac Arrhythmias.

Authors:  Rami Shinnawi; Lior Gepstein
Journal:  Curr Treat Options Cardiovasc Med       Date:  2014-09

10.  Two Different Functions of Connexin43 Confer Two Different Bone Phenotypes in Zebrafish.

Authors:  Akihiro Misu; Hiroaki Yamanaka; Toshihiro Aramaki; Shigeru Kondo; I Martha Skerrett; M Kathryn Iovine; Masakatsu Watanabe
Journal:  J Biol Chem       Date:  2016-04-25       Impact factor: 5.157

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