Literature DB >> 23385574

Self-organization of the vesicular stomatitis virus nucleocapsid into a bullet shape.

Ambroise Desfosses1, Euripedes A Ribeiro, Guy Schoehn, Danielle Blondel, Delphine Guilligay, Marc Jamin, Rob W H Ruigrok, Irina Gutsche.   

Abstract

The typical bullet shape of Rhabdoviruses is thought to rely on the matrix protein for stabilizing the nucleocapsid coil. Here we scrutinize the morphology of purified and recombinant nucleocapsids of vesicular stomatitis virus in vitro. We elucidate pH and ionic strength conditions for their folding into conical tips and further growth into whole bullets, and provide cryo-electron microscopy reconstructions of the bullet tip and the helical trunk. We address conformational variability of the reconstituted nucleocapsids and the issue of constraints imposed by the binding of matrix protein. Our findings bridge the gap between the isolated nucleoprotein-RNA string in its form of an undulating ribbon, and the tight bullet-shaped virion skeleton.

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Year:  2013        PMID: 23385574     DOI: 10.1038/ncomms2435

Source DB:  PubMed          Journal:  Nat Commun        ISSN: 2041-1723            Impact factor:   14.919


  27 in total

1.  EMAN: semiautomated software for high-resolution single-particle reconstructions.

Authors:  S J Ludtke; P R Baldwin; W Chiu
Journal:  J Struct Biol       Date:  1999-12-01       Impact factor: 2.867

2.  Structure of the RNA inside the vesicular stomatitis virus nucleocapsid.

Authors:  F Iseni; F Baudin; D Blondel; R W Ruigrok
Journal:  RNA       Date:  2000-02       Impact factor: 4.942

Review 3.  Quasi-equivalent viruses: a paradigm for protein assemblies.

Authors:  J E Johnson; J A Speir
Journal:  J Mol Biol       Date:  1997-06-27       Impact factor: 5.469

4.  Accurate determination of local defocus and specimen tilt in electron microscopy.

Authors:  Joseph A Mindell; Nikolaus Grigorieff
Journal:  J Struct Biol       Date:  2003-06       Impact factor: 2.867

5.  On the fitting of model electron densities into EM reconstructions: a reciprocal-space formulation.

Authors:  J Navaza; J Lepault; F A Rey; C Alvarez-Rúa; J Borge
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2002-09-28

6.  UCSF Chimera--a visualization system for exploratory research and analysis.

Authors:  Eric F Pettersen; Thomas D Goddard; Conrad C Huang; Gregory S Couch; Daniel M Greenblatt; Elaine C Meng; Thomas E Ferrin
Journal:  J Comput Chem       Date:  2004-10       Impact factor: 3.376

7.  Structural dissection of Ebola virus and its assembly determinants using cryo-electron tomography.

Authors:  Tanmay A M Bharat; Takeshi Noda; James D Riches; Verena Kraehling; Larissa Kolesnikova; Stephan Becker; Yoshihiro Kawaoka; John A G Briggs
Journal:  Proc Natl Acad Sci U S A       Date:  2012-02-27       Impact factor: 11.205

8.  SPIDER image processing for single-particle reconstruction of biological macromolecules from electron micrographs.

Authors:  Tanvir R Shaikh; Haixiao Gao; William T Baxter; Francisco J Asturias; Nicolas Boisset; Ardean Leith; Joachim Frank
Journal:  Nat Protoc       Date:  2008       Impact factor: 13.491

9.  Structure of the vesicular stomatitis virus nucleoprotein-RNA complex.

Authors:  Todd J Green; Xin Zhang; Gail W Wertz; Ming Luo
Journal:  Science       Date:  2006-06-15       Impact factor: 47.728

10.  In vitro reassembly of vesicular stomatitis virus skeletons.

Authors:  W W Newcomb; G J Tobin; J J McGowan; J C Brown
Journal:  J Virol       Date:  1982-03       Impact factor: 5.103

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  13 in total

1.  Generation and Assembly of Virus-Specific Nucleocapsids of the Respiratory Syncytial Virus.

Authors:  Yunrong Gao; Claire Ogilvie; Anirudh Raghavan; Chloe Von Hoffmann; Bo Liang
Journal:  J Vis Exp       Date:  2021-07-27       Impact factor: 1.424

2.  Locations and in situ structure of the polymerase complex inside the virion of vesicular stomatitis virus.

Authors:  Zhu Si; Kang Zhou; Jun Tsao; Ming Luo; Z Hong Zhou
Journal:  Proc Natl Acad Sci U S A       Date:  2022-04-27       Impact factor: 12.779

Review 3.  Three-dimensional reconstruction of helical polymers.

Authors:  Edward H Egelman
Journal:  Arch Biochem Biophys       Date:  2015-04-22       Impact factor: 4.013

4.  Tracking the Fate of Genetically Distinct Vesicular Stomatitis Virus Matrix Proteins Highlights the Role for Late Domains in Assembly.

Authors:  Timothy K Soh; Sean P J Whelan
Journal:  J Virol       Date:  2015-09-02       Impact factor: 5.103

5.  Structural studies on the authentic mumps virus nucleocapsid showing uncoiling by the phosphoprotein.

Authors:  Robert Cox; Adrian Pickar; Shihong Qiu; Jun Tsao; Cynthia Rodenburg; Terje Dokland; Andrew Elson; Biao He; Ming Luo
Journal:  Proc Natl Acad Sci U S A       Date:  2014-10-06       Impact factor: 11.205

6.  Asymmetric packaging of polymerases within vesicular stomatitis virus.

Authors:  Jeffery Hodges; Xiaolin Tang; Michael B Landesman; John B Ruedas; Anil Ghimire; Manasa V Gudheti; Jacques Perrault; Erik M Jorgensen; Jordan M Gerton; Saveez Saffarian
Journal:  Biochem Biophys Res Commun       Date:  2013-09-19       Impact factor: 3.575

Review 7.  RNA Encapsidation and Packaging in the Phleboviruses.

Authors:  Katherine E Hornak; Jean-Marc Lanchy; J Stephen Lodmell
Journal:  Viruses       Date:  2016-07-15       Impact factor: 5.048

8.  Structural analysis of the complex between influenza B nucleoprotein and human importin-α.

Authors:  Alice Labaronne; Sigrid Milles; Amélie Donchet; Malene Ringkjøbing Jensen; Martin Blackledge; Jean-Marie Bourhis; Rob W H Ruigrok; Thibaut Crépin
Journal:  Sci Rep       Date:  2017-12-07       Impact factor: 4.379

Review 9.  Nucleocapsid Structure of Negative Strand RNA Virus.

Authors:  Ming Luo; James Ross Terrell; Shelby Ashlyn Mcmanus
Journal:  Viruses       Date:  2020-07-30       Impact factor: 5.048

10.  A paramyxovirus-like model for Ebola virus bipartite promoters.

Authors:  Irina Gutsche; Philippe le Mercier; Daniel Kolakofsky
Journal:  PLoS Pathog       Date:  2020-11-05       Impact factor: 6.823

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