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Literature DB >> 23381120

Q(ST)-F(ST) comparisons: evolutionary and ecological insights from genomic heterogeneity.

Tuomas Leinonen¹, R J Scott McCairns, Robert B O'Hara, Juha Merilä.

Abstract

Comparative studies of the divergence of quantitative traits and neutral molecular markers, known as Q(ST)-F(ST) comparisons, provide a means for researchers to distinguish between natural selection and genetic drift as causes of population differentiation in complex polygenic traits. The use of Q(ST)-F(ST) comparisons has increased rapidly in the last few years, highlighting the utility of this approach for addressing a wide range of questions that are relevant to evolutionary and ecological genetics. These studies have also provided lessons for the design of future Q(ST)-F(ST) comparisons. Methods based on the Q(ST)-F(ST) approach could also be used to analyse various types of 'omics' data in new and revealing ways.

Mesh：

Substances：
Genetic Markers

Year: 2013 PMID： 23381120 DOI： 10.1038/nrg3395

Source DB: PubMed Journal: Nat Rev Genet ISSN： 1471-0056 Impact factor: 53.242

99 in total

1. Rapid, local adaptation of zooplankton behavior to changes in predation pressure in the absence of neutral genetic changes.

Authors: C Cousyn; L De Meester; J K Colbourne; L Brendonck; D Verschuren; F Volckaert
Journal: Proc Natl Acad Sci U S A Date: 2001-05-15 Impact factor: 11.205

2. Genetic variability at neutral markers, quantitative trait land trait in a subdivided population under selection.

Authors: Valérie Le Corre; Antoine Kremer
Journal: Genetics Date: 2003-07 Impact factor: 4.562

3. Variation in gene expression within and among natural populations.

Authors: Marjorie F Oleksiak; Gary A Churchill; Douglas L Crawford
Journal: Nat Genet Date: 2002-09-03 Impact factor: 38.330

4. Selection for increased cyproconazole tolerance in Mycosphaerella graminicola through local adaptation and in response to host resistance.

Authors: J Zhan; F L Stefanato; B A McDonald
Journal: Mol Plant Pathol Date: 2006-07 Impact factor: 5.663

5. Molecular and quantitative genetic divergence among populations of house mice with known evolutionary histories.

Authors: T J Morgan; M A Evans; T Garland; J G Swallow; P A Carter
Journal: Heredity (Edinb) Date: 2005-05 Impact factor: 3.821

6. A critical assessment of storytelling: gene ontology categories and the importance of validating genomic scans.

Authors: Pavlos Pavlidis; Jeffrey D Jensen; Wolfgang Stephan; Alexandros Stamatakis
Journal: Mol Biol Evol Date: 2012-05-21 Impact factor: 16.240

Review 7. History, chance and adaptation during biological invasion: separating stochastic phenotypic evolution from response to selection.

Authors: Stephen R Keller; Douglas R Taylor
Journal: Ecol Lett Date: 2008-08 Impact factor: 9.492

Q(ST)-F(ST) comparisons: evolutionary and ecological insights from genomic heterogeneity.

1. Rapid, local adaptation of zooplankton behavior to changes in predation pressure in the absence of neutral genetic changes.

2. Genetic variability at neutral markers, quantitative trait land trait in a subdivided population under selection.

3. Variation in gene expression within and among natural populations.

4. Selection for increased cyproconazole tolerance in Mycosphaerella graminicola through local adaptation and in response to host resistance.

5. Molecular and quantitative genetic divergence among populations of house mice with known evolutionary histories.

6. A critical assessment of storytelling: gene ontology categories and the importance of validating genomic scans.

Review 7. History, chance and adaptation during biological invasion: separating stochastic phenotypic evolution from response to selection.

Review 8. Whither Pst? The approximation of Qst by Pst in evolutionary and conservation biology.

9. Allen's rule revisited: quantitative genetics of extremity length in the common frog along a latitudinal gradient.

10. Influence of mutation rate on estimators of genetic differentiation--lessons from Arabidopsis thaliana.

1. Genome-Wide Scan for Adaptive Divergence and Association with Population-Specific Covariates.

2. Evolutionary Metabolomics Identifies Substantial Metabolic Divergence between Maize and Its Wild Ancestor, Teosinte.

Review 3. Ecological genomics of local adaptation.

4. Worldwide patterns of human epigenetic variation.

5. The Effects of Demography and Genetics on the Neutral Distribution of Quantitative Traits.

Review 6. Population genomics perspectives on convergent adaptation.

7. Mathematical Constraints on F_ST: Biallelic Markers in Arbitrarily Many Populations.

8. Detecting Adaptive Differentiation in Structured Populations with Genomic Data and Common Gardens.

9. Effects of fragmentation on plant adaptation to urban environments.

10. Adaptive evolution in urban ecosystems.