Literature DB >> 23376973

A unique Oct4 interface is crucial for reprogramming to pluripotency.

Daniel Esch1, Juha Vahokoski, Matthew R Groves, Vivian Pogenberg, Vlad Cojocaru, Hermann Vom Bruch, Dong Han, Hannes C A Drexler, Marcos J Araúzo-Bravo, Calista K L Ng, Ralf Jauch, Matthias Wilmanns, Hans R Schöler.   

Abstract

Terminally differentiated cells can be reprogrammed to pluripotency by the forced expression of Oct4, Sox2, Klf4 and c-Myc. However, it remains unknown how this leads to the multitude of epigenetic changes observed during the reprogramming process. Interestingly, Oct4 is the only factor that cannot be replaced by other members of the same family to induce pluripotency. To understand the unique role of Oct4 in reprogramming, we determined the structure of its POU domain bound to DNA. We show that the linker between the two DNA-binding domains is structured as an α-helix and exposed to the protein's surface, in contrast to the unstructured linker of Oct1. Point mutations in this α-helix alter or abolish the reprogramming activity of Oct4, but do not affect its other fundamental properties. On the basis of mass spectrometry studies of the interactome of wild-type and mutant Oct4, we propose that the linker functions as a protein-protein interaction interface and plays a crucial role during reprogramming by recruiting key epigenetic players to Oct4 target genes. Thus, we provide molecular insights to explain how Oct4 contributes to the reprogramming process.

Entities:  

Mesh:

Substances:

Year:  2013        PMID: 23376973     DOI: 10.1038/ncb2680

Source DB:  PubMed          Journal:  Nat Cell Biol        ISSN: 1465-7392            Impact factor:   28.824


  38 in total

1.  Crystal structure of a POU/HMG/DNA ternary complex suggests differential assembly of Oct4 and Sox2 on two enhancers.

Authors:  Attila Reményi; Katharina Lins; L Johan Nissen; Rolland Reinbold; Hans R Schöler; Matthias Wilmanns
Journal:  Genes Dev       Date:  2003-08-15       Impact factor: 11.361

2.  Oct4 is required for primordial germ cell survival.

Authors:  James Kehler; Elena Tolkunova; Birgit Koschorz; Maurizio Pesce; Luca Gentile; Michele Boiani; Hilda Lomelí; Andras Nagy; K John McLaughlin; Hans R Schöler; Alexey Tomilin
Journal:  EMBO Rep       Date:  2004-11       Impact factor: 8.807

Review 3.  Directing reprogramming to pluripotency by transcription factors.

Authors:  Kenjiro Adachi; Hans R Schöler
Journal:  Curr Opin Genet Dev       Date:  2012-08-03       Impact factor: 5.578

4.  Oct-1 POU domain-DNA interactions: cooperative binding of isolated subdomains and effects of covalent linkage.

Authors:  J D Klemm; C O Pabo
Journal:  Genes Dev       Date:  1996-01-01       Impact factor: 11.361

5.  Crystal structure of the Oct-1 POU domain bound to an octamer site: DNA recognition with tethered DNA-binding modules.

Authors:  J D Klemm; M A Rould; R Aurora; W Herr; C O Pabo
Journal:  Cell       Date:  1994-04-08       Impact factor: 41.582

6.  Features and development of Coot.

Authors:  P Emsley; B Lohkamp; W G Scott; K Cowtan
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

7.  Coactivator OBF-1 makes selective contacts with both the POU-specific domain and the POU homeodomain and acts as a molecular clamp on DNA.

Authors:  P Sauter; P Matthias
Journal:  Mol Cell Biol       Date:  1998-12       Impact factor: 4.272

8.  Generation of induced pluripotent stem cells without Myc from mouse and human fibroblasts.

Authors:  Masato Nakagawa; Michiyo Koyanagi; Koji Tanabe; Kazutoshi Takahashi; Tomoko Ichisaka; Takashi Aoi; Keisuke Okita; Yuji Mochiduki; Nanako Takizawa; Shinya Yamanaka
Journal:  Nat Biotechnol       Date:  2007-11-30       Impact factor: 54.908

9.  MolProbity: all-atom structure validation for macromolecular crystallography.

Authors:  Vincent B Chen; W Bryan Arendall; Jeffrey J Headd; Daniel A Keedy; Robert M Immormino; Gary J Kapral; Laura W Murray; Jane S Richardson; David C Richardson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-12-21

10.  Phaser crystallographic software.

Authors:  Airlie J McCoy; Ralf W Grosse-Kunstleve; Paul D Adams; Martyn D Winn; Laurent C Storoni; Randy J Read
Journal:  J Appl Crystallogr       Date:  2007-07-13       Impact factor: 3.304

View more
  66 in total

1.  The oncogene c-Jun impedes somatic cell reprogramming.

Authors:  Jing Liu; Qingkai Han; Tianran Peng; Meixiu Peng; Bei Wei; Dongwei Li; Xiaoshan Wang; Shengyong Yu; Jiaqi Yang; Shangtao Cao; Kaimeng Huang; Andrew Paul Hutchins; He Liu; Junqi Kuang; Zhiwei Zhou; Jing Chen; Haoyu Wu; Lin Guo; Yongqiang Chen; You Chen; Xuejia Li; Hongling Wu; Baojian Liao; Wei He; Hong Song; Hongjie Yao; Guangjin Pan; Jiekai Chen; Duanqing Pei
Journal:  Nat Cell Biol       Date:  2015-06-22       Impact factor: 28.824

2.  Tethering of Lsh at the Oct4 locus promotes gene repression associated with epigenetic changes.

Authors:  Jianke Ren; Nathaniel A Hathaway; Gerald R Crabtree; Kathrin Muegge
Journal:  Epigenetics       Date:  2018-02-06       Impact factor: 4.528

3.  The pioneer factor OCT4 requires the chromatin remodeller BRG1 to support gene regulatory element function in mouse embryonic stem cells.

Authors:  Hamish W King; Robert J Klose
Journal:  Elife       Date:  2017-03-13       Impact factor: 8.140

Review 4.  Molecular control of induced pluripotency.

Authors:  Thorold W Theunissen; Rudolf Jaenisch
Journal:  Cell Stem Cell       Date:  2014-06-05       Impact factor: 24.633

Review 5.  Master regulators in development: Views from the Drosophila retinal determination and mammalian pluripotency gene networks.

Authors:  Trevor L Davis; Ilaria Rebay
Journal:  Dev Biol       Date:  2016-12-13       Impact factor: 3.582

6.  Site-specific Disruption of the Oct4/Sox2 Protein Interaction Reveals Coordinated Mesendodermal Differentiation and the Epithelial-Mesenchymal Transition.

Authors:  Xiao Pan; Xiaohui Cang; Songsong Dan; Jingchao Li; Jie Cheng; Bo Kang; Xiaotao Duan; Binghui Shen; Ying-Jie Wang
Journal:  J Biol Chem       Date:  2016-07-01       Impact factor: 5.157

7.  OCT4 spliced variants are highly expressed in brain cancer tissues and inhibition of OCT4B1 causes G2/M arrest in brain cancer cells.

Authors:  Malek Hossein Asadi; Khosrow Khalifeh; Seyed Javad Mowla
Journal:  J Neurooncol       Date:  2016-09-01       Impact factor: 4.130

Review 8.  Mechanisms for enhancing cellular reprogramming.

Authors:  Abdenour Soufi
Journal:  Curr Opin Genet Dev       Date:  2014-03-04       Impact factor: 5.578

9.  Permissive epigenomes endow reprogramming competence to transcriptional regulators.

Authors:  Kee-Pyo Kim; Jinmi Choi; Juyong Yoon; Jan M Bruder; Borami Shin; Jonghun Kim; Marcos J Arauzo-Bravo; Dong Han; Guangming Wu; Dong Wook Han; Johnny Kim; Patrick Cramer; Hans R Schöler
Journal:  Nat Chem Biol       Date:  2020-08-17       Impact factor: 15.040

10.  An expressed retrogene of the master embryonic stem cell gene POU5F1 is associated with prostate cancer susceptibility.

Authors:  Joan P Breyer; Daniel C Dorset; Travis A Clark; Kevin M Bradley; Tiina A Wahlfors; Kate M McReynolds; William H Maynard; Sam S Chang; Michael S Cookson; Joseph A Smith; Johanna Schleutker; William D Dupont; Jeffrey R Smith
Journal:  Am J Hum Genet       Date:  2014-02-27       Impact factor: 11.025

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.