Literature DB >> 23370699

Nonlinear spatio-temporal filtering of dynamic PET data using a four-dimensional Gaussian filter and expectation-maximization deconvolution.

J M Floberg1, J E Holden.   

Abstract

We introduce a method for denoising dynamic PET data, spatio-temporal expectation-maximization (STEM) filtering, that combines four-dimensional Gaussian filtering withEMdeconvolution. The initial Gaussian filter suppresses noise at a broad range of spatial and temporal frequencies and EM deconvolution quickly restores the frequencies most important to the signal. We aim to demonstrate that STEM filtering can improve variance in both individual time frames and in parametric images without introducing significant bias. We evaluate STEM filtering with a dynamic phantom study, and with simulated and human dynamic PET studies of a tracer with reversible binding behaviour, [C-11]raclopride, and a tracer with irreversible binding behaviour, [F-18]FDOPA. STEM filtering is compared to a number of established three and four-dimensional denoising methods. STEM filtering provides substantial improvements in variance in both individual time frames and in parametric images generated with a number of kinetic analysis techniques while introducing little bias. STEM filtering does bias early frames, but this does not affect quantitative parameter estimates. STEM filtering is shown to be superior to the other simple denoising methods studied. STEM filtering is a simple and effective denoising method that could be valuable for a wide range of dynamic PET applications.

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Year:  2013        PMID: 23370699      PMCID: PMC3627355          DOI: 10.1088/0031-9155/58/4/1151

Source DB:  PubMed          Journal:  Phys Med Biol        ISSN: 0031-9155            Impact factor:   3.609


  28 in total

1.  Modeling dynamic PET-SPECT studies in the wavelet domain.

Authors:  F E Turkheimer; R B Banati; D Visvikis; J A Aston; R N Gunn; V J Cunningham
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2.  4D maximum a posteriori reconstruction in dynamic SPECT using a compartmental model-based prior.

Authors:  D J Kadrmas; G T Gullberg
Journal:  Phys Med Biol       Date:  2001-05       Impact factor: 3.609

3.  Spatiotemporal reconstruction of list-mode PET data.

Authors:  Thomas E Nichols; Jinyi Qi; Evren Asma; Richard M Leahy
Journal:  IEEE Trans Med Imaging       Date:  2002-04       Impact factor: 10.048

4.  Positron emission tomography compartmental models: a basis pursuit strategy for kinetic modeling.

Authors:  Roger N Gunn; Steve R Gunn; Federico E Turkheimer; John A D Aston; Vincent J Cunningham
Journal:  J Cereb Blood Flow Metab       Date:  2002-12       Impact factor: 6.200

5.  Noise reduction in the simplified reference tissue model for neuroreceptor functional imaging.

Authors:  Yanjun Wu; Richard E Carson
Journal:  J Cereb Blood Flow Metab       Date:  2002-12       Impact factor: 6.200

6.  A linear wavelet filter for parametric imaging with dynamic PET.

Authors:  Federico E Turkheimer; John A D Aston; Richard B Banati; Cyril Riddell; Vincent J Cunningham
Journal:  IEEE Trans Med Imaging       Date:  2003-03       Impact factor: 10.048

7.  Improved kinetic analysis of dynamic PET data with optimized HYPR-LR.

Authors:  John M Floberg; Charles A Mistretta; Jamey P Weichert; Lance T Hall; James E Holden; Bradley T Christian
Journal:  Med Phys       Date:  2012-06       Impact factor: 4.071

8.  A Wiener filter for nuclear medicine images.

Authors:  M A King; P W Doherty; R B Schwinger; B C Penney
Journal:  Med Phys       Date:  1983 Nov-Dec       Impact factor: 4.071

9.  Graphical evaluation of blood-to-brain transfer constants from multiple-time uptake data. Generalizations.

Authors:  C S Patlak; R G Blasberg
Journal:  J Cereb Blood Flow Metab       Date:  1985-12       Impact factor: 6.200

10.  Use of wavelet transforms in analysis of time-activity data from cardiac PET.

Authors:  J W Lin; A F Laine; O Akinboboye; S R Bergmann
Journal:  J Nucl Med       Date:  2001-02       Impact factor: 10.057

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  1 in total

1.  Dynamic image denoising for voxel-wise quantification with Statistical Parametric Mapping in molecular neuroimaging.

Authors:  Stergios Tsartsalis; Benjamin B Tournier; Christophe E Graf; Nathalie Ginovart; Vicente Ibáñez; Philippe Millet
Journal:  PLoS One       Date:  2018-09-05       Impact factor: 3.240

  1 in total

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