Literature DB >> 23367445

Modeling of the nervous system: from modulation of glutamatergic and gabaergic molecular dynamics to neuron spiking activity.

Jean-Marie C Bouteiller1, Arnaud Legendre, Sushmita L Allam, Nicolas Ambert, Eric Y Hu, Renaud Greget, Anne F Keller, Fabien Pernot, Serge Bischoff, Michel Baudry, Theodore W Berger.   

Abstract

One of the fundamental characteristics of the brain is its hierarchical and temporal organization: scales in both space and time must be considered to fully grasp the system's underlying mechanisms and their impact on brain function. Complex interactions taking place at the molecular level regulate neuronal activity that further modifies the function of millions of neurons connected by trillions of synapses, ultimately giving rise to complex function and behavior at the system level. Likewise, the spatial complexity is accompanied by a complex temporal integration of events taking place at the microsecond scale leading to slower changes occurring at the second, minute and hour scales. These integrations across hierarchies of the nervous system are sufficiently complex to have impeded the development of routine multi-level modeling methodologies. The present study describes an example of our multiscale efforts to rise from the biomolecular level to the neuron level. We more specifically describe how we integrate biomolecular mechanisms taking place at glutamatergic and gabaergic synapses and integrate them to study the impact of these modifications on spiking activity of a CA1 pyramidal cell in the hippocampus.

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Year:  2012        PMID: 23367445      PMCID: PMC4155903          DOI: 10.1109/EMBC.2012.6347510

Source DB:  PubMed          Journal:  Conf Proc IEEE Eng Med Biol Soc        ISSN: 1557-170X


  9 in total

1.  GABAA receptor kinetics in the cerebellar nuclei: evidence for detection of transmitter from distant release sites.

Authors:  Jason R Pugh; Indira M Raman
Journal:  Biophys J       Date:  2004-12-30       Impact factor: 4.033

2.  Maximum likelihood fitting of single channel NMDA activity with a mechanism composed of independent dimers of subunits.

Authors:  Stephanie Schorge; Sergio Elenes; David Colquhoun
Journal:  J Physiol       Date:  2005-10-13       Impact factor: 5.182

Review 3.  Simulation of networks of spiking neurons: a review of tools and strategies.

Authors:  Romain Brette; Michelle Rudolph; Ted Carnevale; Michael Hines; David Beeman; James M Bower; Markus Diesmann; Abigail Morrison; Philip H Goodman; Frederick C Harris; Milind Zirpe; Thomas Natschläger; Dejan Pecevski; Bard Ermentrout; Mikael Djurfeldt; Anders Lansner; Olivier Rochel; Thierry Vieville; Eilif Muller; Andrew P Davison; Sami El Boustani; Alain Destexhe
Journal:  J Comput Neurosci       Date:  2007-07-12       Impact factor: 1.621

Review 4.  Computational models of neuronal biophysics and the characterization of potential neuropharmacological targets.

Authors:  Michele Ferrante; Kim T Blackwell; Michele Migliore; Giorgio A Ascoli
Journal:  Curr Med Chem       Date:  2008       Impact factor: 4.530

5.  Modeling glutamatergic synapses: insights into mechanisms regulating synaptic efficacy.

Authors:  Jean-Marie C Bouteiller; Michel Baudry; Sushmita L Allam; Renaud J Greget; Serge Bischoff; Theodore W Berger
Journal:  J Integr Neurosci       Date:  2008-06       Impact factor: 2.117

6.  Integrated multiscale modeling of the nervous system: predicting changes in hippocampal network activity by a positive AMPA receptor modulator.

Authors:  Jean-Marie C Bouteiller; Sushmita L Allam; Eric Y Hu; Renaud Greget; Nicolas Ambert; Anne Florence Keller; Serge Bischoff; Michel Baudry; Theodore W Berger
Journal:  IEEE Trans Biomed Eng       Date:  2011-06-02       Impact factor: 4.538

7.  Computational studies of NMDA receptors: differential effects of neuronal activity on efficacy of competitive and non-competitive antagonists.

Authors:  Nicolas Ambert; Renaud Greget; Olivier Haeberlé; Serge Bischoff; Theodore W Berger; Jean-Marie Bouteiller; Michel Baudry
Journal:  Open Access Bioinformatics       Date:  2010

8.  Synaptic plasticity and learning: selective impairment of learning rats and blockade of long-term potentiation in vivo by the N-methyl-D-aspartate receptor antagonist AP5.

Authors:  R G Morris
Journal:  J Neurosci       Date:  1989-09       Impact factor: 6.167

9.  The optimal height of the synaptic cleft.

Authors:  Leonid P Savtchenko; Dmitri A Rusakov
Journal:  Proc Natl Acad Sci U S A       Date:  2007-01-29       Impact factor: 11.205

  9 in total

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