Literature DB >> 23355752

Autocovariance Structures for Radial Averages in Small Angle X-Ray Scattering Experiments.

F Jay Breidt1, Andreea Erciulescu, Mark van der Woerd.   

Abstract

Small-angle X-ray scattering (SAXS) is a technique for obtaining low-resolution structural information about biological macromolecules, by exposing a dilute solution to a high-intensity X-ray beam and capturing the resulting scattering pattern on a two-dimensional detector. The two-dimensional pattern is reduced to a one-dimensional curve through radial averaging; that is, by averaging across annuli on the detector plane. Subsequent analysis of structure relies on these one-dimensional data. This paper reviews the technique of SAXS and investigates autocorrelation structure in the detector plane and in the radial averages. Across a range of experimental conditions and molecular types, spatial autocorrelation in the detector plane is present and is well-described by a stationary kernel convolution model. The corresponding autocorrelation structure for the radial averages is non-stationary. Implications of the autocorrelation structure for inference about macromolecular structure are discussed.

Entities:  

Year:  2012        PMID: 23355752      PMCID: PMC3551296          DOI: 10.1111/j.1467-9892.2011.00779.x

Source DB:  PubMed          Journal:  J Time Ser Anal        ISSN: 0143-9782            Impact factor:   1.366


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