Literature DB >> 23353603

Linear transforms for Fourier data on the sphere: application to high angular resolution diffusion MRI of the brain.

Justin P Haldar1, Richard M Leahy.   

Abstract

This paper presents a novel family of linear transforms that can be applied to data collected from the surface of a 2-sphere in three-dimensional Fourier space. This family of transforms generalizes the previously-proposed Funk-Radon Transform (FRT), which was originally developed for estimating the orientations of white matter fibers in the central nervous system from diffusion magnetic resonance imaging data. The new family of transforms is characterized theoretically, and efficient numerical implementations of the transforms are presented for the case when the measured data is represented in a basis of spherical harmonics. After these general discussions, attention is focused on a particular new transform from this family that we name the Funk-Radon and Cosine Transform (FRACT). Based on theoretical arguments, it is expected that FRACT-based analysis should yield significantly better orientation information (e.g., improved accuracy and higher angular resolution) than FRT-based analysis, while maintaining the strong characterizability and computational efficiency of the FRT. Simulations are used to confirm these theoretical characteristics, and the practical significance of the proposed approach is illustrated with real diffusion weighted MRI brain data. These experiments demonstrate that, in addition to having strong theoretical characteristics, the proposed approach can outperform existing state-of-the-art orientation estimation methods with respect to measures such as angular resolution and robustness to noise and modeling errors.
Copyright © 2013 Elsevier Inc. All rights reserved.

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Year:  2013        PMID: 23353603      PMCID: PMC3594568          DOI: 10.1016/j.neuroimage.2013.01.022

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  59 in total

1.  Characterization of anisotropy in high angular resolution diffusion-weighted MRI.

Authors:  Lawrence R Frank
Journal:  Magn Reson Med       Date:  2002-06       Impact factor: 4.668

2.  High angular resolution diffusion imaging reveals intravoxel white matter fiber heterogeneity.

Authors:  David S Tuch; Timothy G Reese; Mette R Wiegell; Nikos Makris; John W Belliveau; Van J Wedeen
Journal:  Magn Reson Med       Date:  2002-10       Impact factor: 4.668

3.  Generalized diffusion tensor imaging and analytical relationships between diffusion tensor imaging and high angular resolution diffusion imaging.

Authors:  Evren Ozarslan; Thomas H Mareci
Journal:  Magn Reson Med       Date:  2003-11       Impact factor: 4.668

4.  Q-ball reconstruction of multimodal fiber orientations using the spherical harmonic basis.

Authors:  Christopher P Hess; Pratik Mukherjee; Eric T Han; Duan Xu; Daniel B Vigneron
Journal:  Magn Reson Med       Date:  2006-07       Impact factor: 4.668

5.  Selection of a convolution function for Fourier inversion using gridding [computerised tomography application].

Authors:  J I Jackson; C H Meyer; D G Nishimura; A Macovski
Journal:  IEEE Trans Med Imaging       Date:  1991       Impact factor: 10.048

6.  Estimation of fiber orientation probability density functions in high angular resolution diffusion imaging.

Authors:  Antonio Tristán-Vega; Carl-Fredrik Westin; Santiago Aja-Fernández
Journal:  Neuroimage       Date:  2009-04-22       Impact factor: 6.556

7.  Estimating crossing fibers: a tensor decomposition approach.

Authors:  Thomas Schultz; Hans-Peter Seidel
Journal:  IEEE Trans Vis Comput Graph       Date:  2008 Nov-Dec       Impact factor: 4.579

8.  Resolving crossing fibres using constrained spherical deconvolution: validation using diffusion-weighted imaging phantom data.

Authors:  J-Donald Tournier; Chun-Hung Yeh; Fernando Calamante; Kuan-Hung Cho; Alan Connelly; Ching-Po Lin
Journal:  Neuroimage       Date:  2008-05-09       Impact factor: 6.556

9.  Optimization of diffusion spectrum imaging and q-ball imaging on clinical MRI system.

Authors:  Li-Wei Kuo; Jyh-Horng Chen; Van Jay Wedeen; Wen-Yih Isaac Tseng
Journal:  Neuroimage       Date:  2008-02-26       Impact factor: 6.556

10.  New diffusion phantoms dedicated to the study and validation of high-angular-resolution diffusion imaging (HARDI) models.

Authors:  Cyril Poupon; Bernard Rieul; Irina Kezele; Muriel Perrin; Fabrice Poupon; Jean-François Mangin
Journal:  Magn Reson Med       Date:  2008-12       Impact factor: 4.668

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  10 in total

1.  A majorize-minimize framework for Rician and non-central chi MR images.

Authors:  Divya Varadarajan; Justin P Haldar
Journal:  IEEE Trans Med Imaging       Date:  2015-04-28       Impact factor: 10.048

2.  Fiber ball imaging.

Authors:  Jens H Jensen; G Russell Glenn; Joseph A Helpern
Journal:  Neuroimage       Date:  2015-10-01       Impact factor: 6.556

3.  A theoretical signal processing framework for linear diffusion MRI: Implications for parameter estimation and experiment design.

Authors:  Divya Varadarajan; Justin P Haldar
Journal:  Neuroimage       Date:  2017-08-19       Impact factor: 6.556

4.  Fast submillimeter diffusion MRI using gSlider-SMS and SNR-enhancing joint reconstruction.

Authors:  Justin P Haldar; Yunsong Liu; Congyu Liao; Qiuyun Fan; Kawin Setsompop
Journal:  Magn Reson Med       Date:  2020-01-10       Impact factor: 4.668

5.  Fiber estimation and tractography in diffusion MRI: development of simulated brain images and comparison of multi-fiber analysis methods at clinical b-values.

Authors:  Bryce Wilkins; Namgyun Lee; Niharika Gajawelli; Meng Law; Natasha Leporé
Journal:  Neuroimage       Date:  2014-12-30       Impact factor: 6.556

6.  Greedy Algorithms for Nonnegativity-Constrained Simultaneous Sparse Recovery.

Authors:  Daeun Kim; Justin P Haldar
Journal:  Signal Processing       Date:  2016-02-06       Impact factor: 4.662

Review 7.  Multimodal neuroimaging computing: the workflows, methods, and platforms.

Authors:  Sidong Liu; Weidong Cai; Siqi Liu; Fan Zhang; Michael Fulham; Dagan Feng; Sonia Pujol; Ron Kikinis
Journal:  Brain Inform       Date:  2015-09-04

8.  Fiber up-sampling and quality assessment of tractograms - towards quantitative brain connectivity.

Authors:  Stefan Sommer; Sebastian Kozerke; Erich Seifritz; Philipp Staempfli
Journal:  Brain Behav       Date:  2016-10-26       Impact factor: 2.708

9.  Multiuser virtual reality environment for visualising neuroimaging data.

Authors:  David W Shattuck
Journal:  Healthc Technol Lett       Date:  2018-10-19

10.  Network Analysis in Disorders of Consciousness: Four Problems and One Proposed Solution (Exponential Random Graph Models).

Authors:  John Dell'Italia; Micah A Johnson; Paul M Vespa; Martin M Monti
Journal:  Front Neurol       Date:  2018-06-12       Impact factor: 4.003

  10 in total

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