Literature DB >> 23345916

Lyotropic ion channel current model compared with ising model.

Leif Matsson1, Virulh Sa-Yakanit, Santipong Boribarn.   

Abstract

Trans-membrane currents in ligand-gated ion channels are calculated in a non-equilibrium, chemically open whole cell system. The model is lyotropic in the sense that dynamics and parameters such as ligand concentration for half-maximal response (scale of response), and threshold for firing in neurons, are nonlinear functions of the reactant concentrations. The derived total current fits recorded data significantly better than those derived from mass action, Ising, and other equilibrium type models, in which the derived response can be displaced from the assessed response by several orders in the ligand concentration. A comparison of the model obtained with an Ising-like model provides a methodology to obtain the non-equilibrium scaling dependence of Ising-like models on the reactant concentrations.

Entities:  

Keywords:  Ising model; Lyotropic ion-channel system; drug potency; ion-channel currents; non-equlibrium neuron firing; non-local coopeartivity; patch clamp

Year:  2005        PMID: 23345916      PMCID: PMC3456347          DOI: 10.1007/s10867-005-4807-z

Source DB:  PubMed          Journal:  J Biol Phys        ISSN: 0092-0606            Impact factor:   1.365


  8 in total

Review 1.  Ligand-gated ion channel currents in a nonstationary lyotropic model.

Authors:  Leif Matsson; Virulh Sa-yakanit; Santipong Boribarn
Journal:  Neurochem Res       Date:  2003-02       Impact factor: 3.996

Review 2.  Challenges for receptor theory as a tool for drug and drug receptor classification.

Authors:  T P Kenakin
Journal:  Trends Pharmacol Sci       Date:  1989-01       Impact factor: 14.819

3.  The Combinations of Haemoglobin with Oxygen and with Carbon Monoxide. I.

Authors:  A V Hill
Journal:  Biochem J       Date:  1913-10       Impact factor: 3.857

4.  Application of the one- and two-dimensional Ising models to studies of cooperativity between ion channels.

Authors:  Y Liu; J P Dilger
Journal:  Biophys J       Date:  1993-01       Impact factor: 4.033

5.  Hill coefficients and the logistic equation.

Authors:  R Barlow; J F Blake
Journal:  Trends Pharmacol Sci       Date:  1989-11       Impact factor: 14.819

6.  DNA Replication and Cell Cycle Progression Regulatedby Long Range Interaction between Protein Complexes bound to DNA.

Authors:  L Matsson
Journal:  J Biol Phys       Date:  2001-12       Impact factor: 1.365

7.  Expression of Ca(2+)-ion permeable alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionate (AMPA) receptors in Xenopus oocytes injected with total RNA from human epileptic temporal lobe.

Authors:  K Jardemark; B Nyström; B Rydenhag; A Hamberger; I Jacobson
Journal:  Neurosci Lett       Date:  1995-07-14       Impact factor: 3.046

8.  Model of DNA dynamics and replication.

Authors:  Leif Matsson
Journal:  J Biol Phys       Date:  2005-12       Impact factor: 1.365

  8 in total
  1 in total

1.  Model of DNA dynamics and replication.

Authors:  Leif Matsson
Journal:  J Biol Phys       Date:  2005-12       Impact factor: 1.365

  1 in total

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