Literature DB >> 23328399

Robustness and epistasis in the C. elegans vulval signaling network revealed by pathway dosage modulation.

Michalis Barkoulas1, Jeroen S van Zon, Josselin Milloz, Alexander van Oudenaarden, Marie-Anne Félix.   

Abstract

Biological systems may perform reproducibly to generate invariant outcomes, despite external or internal noise. One example is the C. elegans vulva, in which the final cell fate pattern is remarkably robust. Although this system has been extensively studied and the molecular network underlying cell fate specification is well understood, very little is known in quantitative terms. Here, through pathway dosage modulation and single molecule fluorescence in situ hybridization, we show that the system can tolerate a 4-fold variation in genetic dose of the upstream signaling molecule LIN-3/epidermal growth factor (EGF) without phenotypic change in cell fate pattern. Furthermore, through tissue-specific dosage perturbations of the EGF and Notch pathways, we determine the first-appearing patterning errors. Finally, by combining different doses of both pathways, we explore how quantitative pathway interactions influence system behavior. Our results highlight the feasibility and significance of launching experimental studies of robustness and quantitative network analysis in genetically tractable, multicellular eukaryotes.
Copyright © 2013 Elsevier Inc. All rights reserved.

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Year:  2013        PMID: 23328399     DOI: 10.1016/j.devcel.2012.12.001

Source DB:  PubMed          Journal:  Dev Cell        ISSN: 1534-5807            Impact factor:   12.270


  34 in total

Review 1.  The developmental genetics of biological robustness.

Authors:  Lamia Mestek Boukhibar; Michalis Barkoulas
Journal:  Ann Bot       Date:  2015-08-20       Impact factor: 4.357

2.  Ras, Ral, and Rap1 in C. elegans.

Authors:  Neal R Rasmussen; David J Reiner
Journal:  Methods Mol Biol       Date:  2021

Review 3.  Pervasive robustness in biological systems.

Authors:  Marie-Anne Félix; Michalis Barkoulas
Journal:  Nat Rev Genet       Date:  2015-08       Impact factor: 53.242

Review 4.  Genomic insights into ayurvedic and western approaches to personalized medicine.

Authors:  Bhavana Prasher; Greg Gibson; Mitali Mukerji
Journal:  J Genet       Date:  2016-03       Impact factor: 1.166

5.  A Real-Time Biosensor for ERK Activity Reveals Signaling Dynamics during C. elegans Cell Fate Specification.

Authors:  Claire de la Cova; Robert Townley; Sergi Regot; Iva Greenwald
Journal:  Dev Cell       Date:  2017-08-17       Impact factor: 12.270

Review 6.  Abstracting the principles of development using imaging and modeling.

Authors:  Fengzhu Xiong; Sean G Megason
Journal:  Integr Biol (Camb)       Date:  2015-06       Impact factor: 2.192

Review 7.  The Caenorhabditis elegans Transgenic Toolbox.

Authors:  Jeremy Nance; Christian Frøkjær-Jensen
Journal:  Genetics       Date:  2019-08       Impact factor: 4.562

8.  Analysis of gene-gene interactions using gene-trait similarity regression.

Authors:  Xin Wang; Michael P Epstein; Jung-Ying Tzeng
Journal:  Hum Hered       Date:  2014-06-21       Impact factor: 0.444

Review 9.  Outstanding questions in developmental ERK signaling.

Authors:  Aleena L Patel; Stanislav Y Shvartsman
Journal:  Development       Date:  2018-07-26       Impact factor: 6.868

10.  Epistasis regulates the developmental stability of the mouse craniofacial shape.

Authors:  Ceferino Varón-González; Nicolas Navarro
Journal:  Heredity (Edinb)       Date:  2018-09-12       Impact factor: 3.821

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