Literature DB >> 23313221

Proteomic analysis of the flooding tolerance mechanism in mutant soybean.

Setsuko Komatsu1, Yohei Nanjo, Minoru Nishimura.   

Abstract

Flooding stress of soybean is a serious problem because it reduces growth; however, flooding-tolerant cultivars have not been identified. To analyze the flooding tolerance mechanism of soybean, the flooding-tolerant mutant was isolated and analyzed using a proteomic technique. Flooding-tolerance tests were repeated five times using gamma-ray irradiated soybeans, whose root growth (M6 stage) was not suppressed even under flooding stress. Two-day-old wild-type and mutant plants were subjected to flooding stress for 2days, and proteins were identified using a gel-based proteomic technique. In wild-type under flooding stress, levels of proteins related to development, protein synthesis/degradation, secondary metabolism, and the cell wall changed; however, these proteins did not markedly differ in the mutant. In contrast, an increased number of fermentation-related proteins were identified in the mutant under flooding stress. The root tips of mutant plants were not affected by flooding stress, even though the wild-type plants had damaged root. Alcohol dehydrogenase activity in the mutant increased at an early stage of flooding stress compared with that of the wild-type. Taken together, these results suggest that activation of the fermentation system in the early stages of flooding may be an important factor for the acquisition of flooding tolerance in soybean.
Copyright © 2012 Elsevier B.V. All rights reserved.

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Year:  2013        PMID: 23313221     DOI: 10.1016/j.jprot.2012.12.023

Source DB:  PubMed          Journal:  J Proteomics        ISSN: 1874-3919            Impact factor:   4.044


  17 in total

1.  Transcriptomic analysis reveals the flooding tolerant mechanism in flooding tolerant line and abscisic acid treated soybean.

Authors:  Xiaojian Yin; Susumu Hiraga; Makita Hajika; Minoru Nishimura; Setsuko Komatsu
Journal:  Plant Mol Biol       Date:  2016-12-23       Impact factor: 4.076

2.  Metabolic profiles of flooding-tolerant mechanism in early-stage soybean responding to initial stress.

Authors:  Xin Wang; Wei Zhu; Akiko Hashiguchi; Minoru Nishimura; Jingkui Tian; Setsuko Komatsu
Journal:  Plant Mol Biol       Date:  2017-07-21       Impact factor: 4.076

Review 3.  Insights to proteomics and metabolomics metal chelation in food crops.

Authors:  Osikemekha Anthony Anani; Inobeme Abel; John Ovie Olomukoro; Ikenna Benedict Onyeachu
Journal:  J Proteins Proteom       Date:  2022-06-20

4.  Morphological and Proteomic Analyses of Soybean Seedling Interaction Mechanism Affected by Fiber Crosslinked with Zinc-Oxide Nanoparticles.

Authors:  Setsuko Komatsu; Kazuki Murata; Sayuri Yakeishi; Kazuyuki Shimada; Hisateru Yamaguchi; Keisuke Hitachi; Kunihiro Tsuchida; Rumina Obi; Shoichi Akita; Ryo Fukuda
Journal:  Int J Mol Sci       Date:  2022-07-03       Impact factor: 6.208

5.  An integrated proteomic and metabolomic study to evaluate the effect of nucleus-cytoplasm interaction in a diploid citrus cybrid between sweet orange and lemon.

Authors:  Teresa Faddetta; Loredana Abbate; Giovanni Renzone; Antonio Palumbo Piccionello; Antonella Maggio; Elisabetta Oddo; Andrea Scaloni; Anna Maria Puglia; Giuseppe Gallo; Francesco Carimi; Sergio Fatta Del Bosco; Francesco Mercati
Journal:  Plant Mol Biol       Date:  2018-10-19       Impact factor: 4.076

6.  Proteomic and biochemical analyses of the cotyledon and root of flooding-stressed soybean plants.

Authors:  Setsuko Komatsu; Takahiro Makino; Hiroshi Yasue
Journal:  PLoS One       Date:  2013-06-14       Impact factor: 3.240

7.  Expression of root-related transcription factors associated with flooding tolerance of soybean (Glycine max).

Authors:  Babu Valliyodan; Tara T Van Toai; Jose Donizeti Alves; Patricia de Fátima P Goulart; Jeong Dong Lee; Felix B Fritschi; Mohammed Atiqur Rahman; Rafiq Islam; J Grover Shannon; Henry T Nguyen
Journal:  Int J Mol Sci       Date:  2014-09-29       Impact factor: 5.923

8.  Gel-free proteomic analysis of soybean root proteins affected by calcium under flooding stress.

Authors:  MyeongWon Oh; Yohei Nanjo; Setsuko Komatsu
Journal:  Front Plant Sci       Date:  2014-10-20       Impact factor: 5.753

9.  Proteomic Analysis of the Relationship between Metabolism and Nonhost Resistance in Soybean Exposed to Bipolaris maydis.

Authors:  Yumei Dong; Yuan Su; Ping Yu; Min Yang; Shusheng Zhu; Xinyue Mei; Xiahong He; Manhua Pan; Youyong Zhu; Chengyun Li
Journal:  PLoS One       Date:  2015-10-29       Impact factor: 3.240

Review 10.  Role of Proteomics in Crop Stress Tolerance.

Authors:  Parvaiz Ahmad; Arafat A H Abdel Latef; Saiema Rasool; Nudrat A Akram; Muhammad Ashraf; Salih Gucel
Journal:  Front Plant Sci       Date:  2016-09-08       Impact factor: 5.753

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