Literature DB >> 23312840

Building silent compartments at the nuclear periphery: a recurrent theme.

Peter Meister1, Angela Taddei.   

Abstract

In eukaryotes, the genetic material is stored in the nucleus, which is enclosed in a double lipid bilayer, the nuclear envelope (NE). It protects the genome from physical stress and separates it from the rest of the cell. On top of this physical function, growing evidence shows that the nuclear periphery contributes to the 3D organization of the genome. In turn, tridimensional organization of chromatin in the nuclear space influences genome expression. Here we review recent findings on the function of this physical barrier in gene repression and latest models on how silent subnuclear compartments at the NE are built in yeast as well as in the nematode C. elegans and mammalian cells; trying to draw parallels between the three systems.
Copyright © 2013 Elsevier Ltd. All rights reserved.

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Year:  2013        PMID: 23312840     DOI: 10.1016/j.gde.2012.12.001

Source DB:  PubMed          Journal:  Curr Opin Genet Dev        ISSN: 0959-437X            Impact factor:   5.578


  24 in total

1.  Recombination at subtelomeres is regulated by physical distance, double-strand break resection and chromatin status.

Authors:  Amandine Batté; Clémentine Brocas; Hélène Bordelet; Antoine Hocher; Myriam Ruault; Adouda Adjiri; Angela Taddei; Karine Dubrana
Journal:  EMBO J       Date:  2017-07-28       Impact factor: 11.598

Review 2.  A requiem to the nuclear matrix: from a controversial concept to 3D organization of the nucleus.

Authors:  S V Razin; O V Iarovaia; Y S Vassetzky
Journal:  Chromosoma       Date:  2014-03-25       Impact factor: 4.316

3.  Epigenomics in 3D: importance of long-range spreading and specific interactions in epigenomic maintenance.

Authors:  Daniel Jost; Cédric Vaillant
Journal:  Nucleic Acids Res       Date:  2018-03-16       Impact factor: 16.971

4.  Sir3 heterochromatin protein promotes non-homologous end joining by direct inhibition of Sae2.

Authors:  Hélène Bordelet; Rafaël Costa; Clémentine Brocas; Jordane Dépagne; Xavier Veaute; Didier Busso; Amandine Batté; Raphaël Guérois; Stéphane Marcand; Karine Dubrana
Journal:  EMBO J       Date:  2021-11-24       Impact factor: 11.598

5.  Painters in chromatin: a unified quantitative framework to systematically characterize epigenome regulation and memory.

Authors:  Amith Z Abdulla; Cédric Vaillant; Daniel Jost
Journal:  Nucleic Acids Res       Date:  2022-08-26       Impact factor: 19.160

6.  Mechanism of chromatin segregation to the nuclear periphery in C. elegans embryos.

Authors:  Adriana Gonzalez-Sandoval; Susan M Gasser
Journal:  Worm       Date:  2016-05-31

7.  Identification of Nucleolus-Associated Chromatin Domains Reveals a Role for the Nucleolus in 3D Organization of the A. thaliana Genome.

Authors:  Frédéric Pontvianne; Marie-Christine Carpentier; Nathalie Durut; Veronika Pavlištová; Karin Jaške; Šárka Schořová; Hugues Parrinello; Marine Rohmer; Craig S Pikaard; Miloslava Fojtová; Jiří Fajkus; Julio Sáez-Vásquez
Journal:  Cell Rep       Date:  2016-07-28       Impact factor: 9.423

8.  Chromatin decondensation is sufficient to alter nuclear organization in embryonic stem cells.

Authors:  Pierre Therizols; Robert S Illingworth; Celine Courilleau; Shelagh Boyle; Andrew J Wood; Wendy A Bickmore
Journal:  Science       Date:  2014-12-05       Impact factor: 47.728

9.  Spatial reorganization of telomeres in long-lived quiescent cells.

Authors:  Micol Guidi; Myriam Ruault; Martial Marbouty; Isabelle Loïodice; Axel Cournac; Cyrille Billaudeau; Antoine Hocher; Julien Mozziconacci; Romain Koszul; Angela Taddei
Journal:  Genome Biol       Date:  2015-09-23       Impact factor: 13.583

10.  Transcriptional Pathways in cPGI2-Induced Adipocyte Progenitor Activation for Browning.

Authors:  Irem Bayindir; Rohollah Babaeikelishomi; Silvia Kocanova; Isabel Sofia Sousa; Sarah Lerch; Olaf Hardt; Stefan Wild; Andreas Bosio; Kerstin Bystricky; Stephan Herzig; Alexandros Vegiopoulos
Journal:  Front Endocrinol (Lausanne)       Date:  2015-08-17       Impact factor: 5.555

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