Literature DB >> 27695653

Mechanism of chromatin segregation to the nuclear periphery in C. elegans embryos.

Adriana Gonzalez-Sandoval1, Susan M Gasser1.   

Abstract

In eukaryotic organisms, gene regulation occurs in the context of chromatin. In the interphase nucleus, euchromatin and heterochromatin occupy distinct space during cell differentiation, with heterochromatin becoming enriched at the nuclear and nucleolar peripheries. This organization is thought to fine-tune gene expression. To elucidate the mechanisms that govern this level of genome organization, screens were carried out in C. elegans which monitored the loss of heterochromatin sequestration at the nuclear periphery. This led to the identification of a novel chromodomain protein, CEC-4 (Caenorhabditis elegans chromodomain protein 4) that mediates the anchoring of H3K9 methylation-bearing chromatin at the nuclear periphery in early to mid-stage embryos. Surprisingly, the loss of CEC-4 does not derepress genes found in heterochromatic domains, nor does it affect differentiation under standard laboratory conditions. On the other hand, CEC-4 contributes to the efficiency with which muscle differentiation is induced following ectopic expression of the master regulator, HLH-1. This is one of the first phenotypes specifically attributed to the ablation of heterochromatin anchoring.

Entities:  

Keywords:  cell differentiation; heterochromatin; histone H3K9 methylation; nuclear organization; nuclear periphery

Year:  2016        PMID: 27695653      PMCID: PMC5022668          DOI: 10.1080/21624054.2016.1190900

Source DB:  PubMed          Journal:  Worm        ISSN: 2162-4046


  48 in total

Review 1.  Lamin-binding Proteins.

Authors:  Katherine L Wilson; Roland Foisner
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-02-17       Impact factor: 10.005

2.  Nuclear architecture of rod photoreceptor cells adapts to vision in mammalian evolution.

Authors:  Irina Solovei; Moritz Kreysing; Christian Lanctôt; Süleyman Kösem; Leo Peichl; Thomas Cremer; Jochen Guck; Boris Joffe
Journal:  Cell       Date:  2009-04-17       Impact factor: 41.582

3.  Noncoding RNAs prevent spreading of a repressive histone mark.

Authors:  Claudia Keller; Raghavendran Kulasegaran-Shylini; Yukiko Shimada; Hans-Rudolf Hotz; Marc Bühler
Journal:  Nat Struct Mol Biol       Date:  2013-07-21       Impact factor: 15.369

4.  The myogenic potency of HLH-1 reveals wide-spread developmental plasticity in early C. elegans embryos.

Authors:  Tetsunari Fukushige; Michael Krause
Journal:  Development       Date:  2005-03-16       Impact factor: 6.868

5.  Repetitive transgenes in C. elegans accumulate heterochromatic marks and are sequestered at the nuclear envelope in a copy-number- and lamin-dependent manner.

Authors:  B D Towbin; P Meister; B L Pike; S M Gasser
Journal:  Cold Spring Harb Symp Quant Biol       Date:  2011-04-05

6.  A 3D map of the human genome at kilobase resolution reveals principles of chromatin looping.

Authors:  Suhas S P Rao; Miriam H Huntley; Neva C Durand; Elena K Stamenova; Ivan D Bochkov; James T Robinson; Adrian L Sanborn; Ido Machol; Arina D Omer; Eric S Lander; Erez Lieberman Aiden
Journal:  Cell       Date:  2014-12-11       Impact factor: 41.582

7.  Lamin B receptor recognizes specific modifications of histone H4 in heterochromatin formation.

Authors:  Yasuhiro Hirano; Kohji Hizume; Hiroshi Kimura; Kunio Takeyasu; Tokuko Haraguchi; Yasushi Hiraoka
Journal:  J Biol Chem       Date:  2012-10-25       Impact factor: 5.157

8.  Neural induction promotes large-scale chromatin reorganisation of the Mash1 locus.

Authors:  Ruth R E Williams; Véronique Azuara; Pascale Perry; Stephan Sauer; Maria Dvorkina; Helle Jørgensen; Jeffery Roix; Philip McQueen; Tom Misteli; Matthias Merkenschlager; Amanda G Fisher
Journal:  J Cell Sci       Date:  2006-01-01       Impact factor: 5.285

9.  Dynamic imaging of genomic loci in living human cells by an optimized CRISPR/Cas system.

Authors:  Baohui Chen; Luke A Gilbert; Beth A Cimini; Joerg Schnitzbauer; Wei Zhang; Gene-Wei Li; Jason Park; Elizabeth H Blackburn; Jonathan S Weissman; Lei S Qi; Bo Huang
Journal:  Cell       Date:  2013-12-19       Impact factor: 41.582

10.  Large histone H3 lysine 9 dimethylated chromatin blocks distinguish differentiated from embryonic stem cells.

Authors:  Bo Wen; Hao Wu; Yoichi Shinkai; Rafael A Irizarry; Andrew P Feinberg
Journal:  Nat Genet       Date:  2009-01-18       Impact factor: 38.330

View more
  2 in total

1.  Shaping the genome via lengthwise compaction, phase separation, and lamina adhesion.

Authors:  Sumitabha Brahmachari; Vinícius G Contessoto; Michele Di Pierro; José N Onuchic
Journal:  Nucleic Acids Res       Date:  2022-05-06       Impact factor: 19.160

Review 2.  The shifting shape of genomes: dynamics of heterochromatin interactions at the nuclear lamina.

Authors:  Victoria E Hoskins; Kristiana Smith; Karen L Reddy
Journal:  Curr Opin Genet Dev       Date:  2021-03-25       Impact factor: 5.578

  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.