Literature DB >> 23304345

MatrixFlow: temporal network visual analytics to track symptom evolution during disease progression.

Adam Perer1, Jimeng Sun.   

Abstract

OBJECTIVE: To develop a visual analytic system to help medical professionals improve disease diagnosis by providing insights for understanding disease progression.
METHODS: We develop MatrixFlow, a visual analytic system that takes clinical event sequences of patients as input, constructs time-evolving networks and visualizes them as a temporal flow of matrices. MatrixFlow provides several interactive features for analysis: 1) one can sort the events based on the similarity in order to accentuate underlying cluster patterns among those events; 2) one can compare co-occurrence events over time and across cohorts through additional line graph visualization.
RESULTS: MatrixFlow is applied to visualize heart failure (HF) symptom events extracted from a large cohort of HF cases and controls (n=50,625), which allows medical experts to reach insights involving temporal patterns and clusters of interest, and compare cohorts in novel ways that may lead to improved disease diagnoses.
CONCLUSIONS: MatrixFlow is an interactive visual analytic system that allows users to quickly discover patterns in clinical event sequences. By unearthing the patterns hidden within and displaying them to medical experts, users become empowered to make decisions influenced by historical patterns.

Entities:  

Mesh:

Year:  2012        PMID: 23304345      PMCID: PMC3540494     

Source DB:  PubMed          Journal:  AMIA Annu Symp Proc        ISSN: 1559-4076


  8 in total

1.  Fast algorithm for detecting community structure in networks.

Authors:  M E J Newman
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2004-06-18

2.  DICON: interactive visual analysis of multidimensional clusters.

Authors:  Nan Cao; David Gotz; Jimeng Sun; Huamin Qu
Journal:  IEEE Trans Vis Comput Graph       Date:  2011-12       Impact factor: 4.579

3.  CareVis: integrated visualization of computerized protocols and temporal patient data.

Authors:  Wolfgang Aigner; Silvia Miksch
Journal:  Artif Intell Med       Date:  2006-07       Impact factor: 5.326

4.  MatrixExplorer: a dual-representation system to explore social networks.

Authors:  Nathalie Henry; Jean-Daniel Fekete
Journal:  IEEE Trans Vis Comput Graph       Date:  2006 Sep-Oct       Impact factor: 4.579

5.  NodeTrix: a hybrid visualization of social networks.

Authors:  Nathalie Henry; Jean-Daniel Fekete; Michael J McGuffin
Journal:  IEEE Trans Vis Comput Graph       Date:  2007 Nov-Dec       Impact factor: 4.579

6.  The natural history of congestive heart failure: the Framingham study.

Authors:  P A McKee; W P Castelli; P M McNamara; W B Kannel
Journal:  N Engl J Med       Date:  1971-12-23       Impact factor: 91.245

7.  Intelligent visualization and exploration of time-oriented data of multiple patients.

Authors:  Denis Klimov; Yuval Shahar; Meirav Taieb-Maimon
Journal:  Artif Intell Med       Date:  2010-03-29       Impact factor: 5.326

8.  Automatic identification of heart failure diagnostic criteria, using text analysis of clinical notes from electronic health records.

Authors:  Roy J Byrd; Steven R Steinhubl; Jimeng Sun; Shahram Ebadollahi; Walter F Stewart
Journal:  Int J Med Inform       Date:  2013-01-11       Impact factor: 4.046

  8 in total
  8 in total

Review 1.  A review of analytics and clinical informatics in health care.

Authors:  Allan F Simpao; Luis M Ahumada; Jorge A Gálvez; Mohamed A Rehman
Journal:  J Med Syst       Date:  2014-04-03       Impact factor: 4.460

Review 2.  Molecular networks in Network Medicine: Development and applications.

Authors:  Edwin K Silverman; Harald H H W Schmidt; Eleni Anastasiadou; Lucia Altucci; Marco Angelini; Lina Badimon; Jean-Luc Balligand; Giuditta Benincasa; Giovambattista Capasso; Federica Conte; Antonella Di Costanzo; Lorenzo Farina; Giulia Fiscon; Laurent Gatto; Michele Gentili; Joseph Loscalzo; Cinzia Marchese; Claudio Napoli; Paola Paci; Manuela Petti; John Quackenbush; Paolo Tieri; Davide Viggiano; Gemma Vilahur; Kimberly Glass; Jan Baumbach
Journal:  Wiley Interdiscip Rev Syst Biol Med       Date:  2020-04-19

3.  A network analysis of self-reported psychoneurological symptoms in patients with head and neck cancer undergoing intensity-modulated radiotherapy.

Authors:  Yufen Lin; Deborah W Bruner; Sudeshna Paul; Andrew H Miller; Nabil F Saba; Kristin A Higgins; Dong M Shin; Wenhui Zhang; Christine Miaskowski; Canhua Xiao
Journal:  Cancer       Date:  2022-08-15       Impact factor: 6.921

Review 4.  Obstetric anaesthesia practice: Dashboard as a dynamic audit tool.

Authors:  Sunil T Pandya; Kausalya Chakravarthy; Aparna Vemareddy
Journal:  Indian J Anaesth       Date:  2018-11

5.  Improving Detection of Disease Re-emergence Using a Web-Based Tool (RED Alert): Design and Case Analysis Study.

Authors:  Nidhi Parikh; Ashlynn R Daughton; William Earl Rosenberger; Derek Jacob Aberle; Maneesha Elizabeth Chitanvis; Forest Michael Altherr; Nileena Velappan; Geoffrey Fairchild; Alina Deshpande
Journal:  JMIR Public Health Surveill       Date:  2021-01-07

6.  Panacea: Visual exploration system for analyzing trends in annual recruitment using time-varying graphs.

Authors:  Toshiyuki T Yokoyama; Masashi Okada; Tadahiro Taniguchi
Journal:  PLoS One       Date:  2021-03-01       Impact factor: 3.240

7.  OncoThreads: visualization of large-scale longitudinal cancer molecular data.

Authors:  Theresa A Harbig; Sabrina Nusrat; Tali Mazor; Qianwen Wang; Alexander Thomson; Hans Bitter; Ethan Cerami; Nils Gehlenborg
Journal:  Bioinformatics       Date:  2021-07-12       Impact factor: 6.937

8.  Visual Analytics: A Method to Explore Natural Histories of Oral Epithelial Dysplasia.

Authors:  Stan Nowak; Miriam Rosin; Wolfgang Stuerzlinger; Lyn Bartram
Journal:  Front Oral Health       Date:  2021-08-05
  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.