Literature DB >> 23297242

SLC4 family transporters in a marine diatom directly pump bicarbonate from seawater.

Kensuke Nakajima1, Atsuko Tanaka, Yusuke Matsuda.   

Abstract

Photosynthesis in marine diatoms is a vital fraction of global primary production empowered by CO(2)-concentrating mechanisms. Acquisition of HCO(3)(-) from seawater is a critical primary step of the CO(2)-concentrating mechanism, allowing marine photoautotrophic eukaryotes to overcome CO(2) limitation in alkaline high-salinity water. However, little is known about molecular mechanisms governing this process. Here, we show the importance of a plasma membrane-type HCO(3)(-) transporter for CO(2) acquisition in a marine diatom. Ten putative solute carrier (SLC) family HCO(3)(-) transporter genes were found in the genome of the marine pennate diatom Phaeodactylum tricornutum. Homologs also exist in marine centric species, Thalassiosira pseudonana, suggesting a general occurrence of SLC transporters in marine diatoms. Seven genes were found to encode putative mammalian-type SLC4 family transporters in P. tricornutum, and three of seven genes were specifically transcribed under low CO(2) conditions. One of these gene products, PtSLC4-2, was localized at the plasmalemma and significantly stimulated both dissolved inorganic carbon (DIC) uptake and photosynthesis in P. tricornutum. DIC uptake by PtSLC4-2 was efficiently inhibited by an anion-exchanger inhibitor, 4,4'-diisothiocyanostilbene-2,2'-disulfonic acid, in a concentration-dependent manner and highly dependent on Na(+) ions at concentrations over 100 mM. These results show that DIC influx into marine diatoms is directly driven at the plasmalemma by a specific HCO(3)(-) transporter with a significant halophilic nature.

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Year:  2013        PMID: 23297242      PMCID: PMC3562803          DOI: 10.1073/pnas.1216234110

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  36 in total

1.  The Na+-driven Cl-/HCO3- exchanger. Cloning, tissue distribution, and functional characterization.

Authors:  C Z Wang; H Yano; K Nagashima; S Seino
Journal:  J Biol Chem       Date:  2000-11-10       Impact factor: 5.157

2.  An electrogenic Na(+)-HCO(-)(3) cotransporter (NBC) with a novel COOH-terminus, cloned from rat brain.

Authors:  M O Bevensee; B M Schmitt; I Choi; M F Romero; W F Boron
Journal:  Am J Physiol Cell Physiol       Date:  2000-06       Impact factor: 4.249

3.  Genes essential to sodium-dependent bicarbonate transport in cyanobacteria: function and phylogenetic analysis.

Authors:  Mari Shibata; Hirokazu Katoh; Masatoshi Sonoda; Hiroshi Ohkawa; Masaya Shimoyama; Hideya Fukuzawa; Aaron Kaplan; Teruo Ogawa
Journal:  J Biol Chem       Date:  2002-03-19       Impact factor: 5.157

4.  Regulation of the expression of intracellular beta-carbonic anhydrase in response to CO2 and light in the marine diatom Phaeodactylum tricornutum.

Authors:  Hisashi Harada; Daisuke Nakatsuma; Maki Ishida; Yusuke Matsuda
Journal:  Plant Physiol       Date:  2005-09-16       Impact factor: 8.340

5.  Unicellular C4 photosynthesis in a marine diatom.

Authors:  J R Reinfelder; A M Kraepiel; F M Morel
Journal:  Nature       Date:  2000-10-26       Impact factor: 49.962

6.  Massive light-dependent cycling of inorganic carbon between oxygenic photosynthetic microorganisms and their surroundings.

Authors:  Dan Tchernov; Jack Silverman; Boaz Luz; Leonora Reinhold; Aaron Kaplan
Journal:  Photosynth Res       Date:  2003       Impact factor: 3.573

7.  Role of glycosylation in the renal electrogenic Na+-HCO3- cotransporter (NBCe1).

Authors:  Inyeong Choi; Lihui Hu; José D Rojas; Bernhard M Schmitt; Walter F Boron
Journal:  Am J Physiol Renal Physiol       Date:  2003-02-25

8.  Role of N-glycosylation in the expression of human band 3-mediated anion transport.

Authors:  J D Groves; M J Tanner
Journal:  Mol Membr Biol       Date:  1994 Jan-Mar       Impact factor: 2.857

9.  Molecular mechanism of kNBC1-carbonic anhydrase II interaction in proximal tubule cells.

Authors:  Alexander Pushkin; Natalia Abuladze; Eitan Gross; Debra Newman; Sergei Tatishchev; Ivan Lee; Olga Fedotoff; Galyna Bondar; Rustam Azimov; Matt Ngyuen; Ira Kurtz
Journal:  J Physiol       Date:  2004-06-24       Impact factor: 5.182

10.  A model for carbohydrate metabolism in the diatom Phaeodactylum tricornutum deduced from comparative whole genome analysis.

Authors:  Peter G Kroth; Anthony Chiovitti; Ansgar Gruber; Veronique Martin-Jezequel; Thomas Mock; Micaela Schnitzler Parker; Michele S Stanley; Aaron Kaplan; Lise Caron; Till Weber; Uma Maheswari; E Virginia Armbrust; Chris Bowler
Journal:  PLoS One       Date:  2008-01-09       Impact factor: 3.240

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  37 in total

Review 1.  Acquisition and metabolism of carbon in the Ochrophyta other than diatoms.

Authors:  John A Raven; Mario Giordano
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2017-09-05       Impact factor: 6.237

Review 2.  Mechanisms of carbon dioxide acquisition and CO2 sensing in marine diatoms: a gateway to carbon metabolism.

Authors:  Yusuke Matsuda; Brian M Hopkinson; Kensuke Nakajima; Christopher L Dupont; Yoshinori Tsuji
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2017-09-05       Impact factor: 6.237

3.  Localization of putative carbonic anhydrases in the marine diatom, Thalassiosira pseudonana.

Authors:  Mio Samukawa; Chen Shen; Brian M Hopkinson; Yusuke Matsuda
Journal:  Photosynth Res       Date:  2014-01-11       Impact factor: 3.573

4.  Localization of enzymes relating to C4 organic acid metabolisms in the marine diatom, Thalassiosira pseudonana.

Authors:  Rie Tanaka; Sae Kikutani; Anggara Mahardika; Yusuke Matsuda
Journal:  Photosynth Res       Date:  2014-01-11       Impact factor: 3.573

Review 5.  Regulatory components of carbon concentrating mechanisms in aquatic unicellular photosynthetic organisms.

Authors:  Vandana Tomar; Gurpreet Kaur Sidhu; Panchsheela Nogia; Rajesh Mehrotra; Sandhya Mehrotra
Journal:  Plant Cell Rep       Date:  2017-08-05       Impact factor: 4.570

6.  The intracellular distribution of inorganic carbon fixing enzymes does not support the presence of a C4 pathway in the diatom Phaeodactylum tricornutum.

Authors:  Daniela Ewe; Masaaki Tachibana; Sae Kikutani; Ansgar Gruber; Carolina Río Bártulos; Grzegorz Konert; Aaron Kaplan; Yusuke Matsuda; Peter G Kroth
Journal:  Photosynth Res       Date:  2018-03-23       Impact factor: 3.573

Review 7.  Diatom Molecular Research Comes of Age: Model Species for Studying Phytoplankton Biology and Diversity.

Authors:  Angela Falciatore; Marianne Jaubert; Jean-Pierre Bouly; Benjamin Bailleul; Thomas Mock
Journal:  Plant Cell       Date:  2019-12-18       Impact factor: 11.277

8.  Plasma Membrane-Type Aquaporins from Marine Diatoms Function as CO2/NH3 Channels and Provide Photoprotection.

Authors:  Hiroaki Matsui; Brian M Hopkinson; Kensuke Nakajima; Yusuke Matsuda
Journal:  Plant Physiol       Date:  2018-08-03       Impact factor: 8.340

9.  Functional Differences in the Blooming Phytoplankton Heterosigma akashiwo and Prorocentrum donghaiense Revealed by Comparative Metaproteomics.

Authors:  Hao Zhang; Yan-Bin He; Peng-Fei Wu; Shu-Feng Zhang; Zhang-Xian Xie; Dong-Xu Li; Lin Lin; Feng Chen; Da-Zhi Wang
Journal:  Appl Environ Microbiol       Date:  2019-09-17       Impact factor: 4.792

10.  A chloroplast pump model for the CO2 concentrating mechanism in the diatom Phaeodactylum tricornutum.

Authors:  Brian M Hopkinson
Journal:  Photosynth Res       Date:  2013-11-29       Impact factor: 3.573

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