Literature DB >> 23294309

Unnatural amino acids as probes of ligand-receptor interactions and their conformational consequences.

Stephan A Pless1, Christopher A Ahern.   

Abstract

G protein-coupled receptors and ion channels couple a wide range of external stimuli to cellular growth and division, metabolism, motility, and a myriad of intra- and intercellular signaling pathways. G protein-coupled receptors initiate complex, interrelated downstream signaling cascades, whereas rapid ionic flux through channels directly supports membrane excitability and mediates cellular functions through second messengers. Because of these characteristics, these ubiquitous transmembrane proteins are valuable therapeutic targets and have provided fertile ground for the development of leading-edge synthetic and chemical biological approaches. Here we summarize recent advances in the use of site-directed incorporation of unnatural amino acids and chemical probes to study ligand-receptor interactions, determine the location of binding sites, and examine the downstream conformational consequences of ligand binding in G protein-coupled receptors and ion channels.

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Year:  2013        PMID: 23294309     DOI: 10.1146/annurev-pharmtox-011112-140343

Source DB:  PubMed          Journal:  Annu Rev Pharmacol Toxicol        ISSN: 0362-1642            Impact factor:   13.820


  26 in total

1.  The tetramerization domain potentiates Kv4 channel function by suppressing closed-state inactivation.

Authors:  Yi-Quan Tang; Jing-Heng Zhou; Fan Yang; Jie Zheng; KeWei Wang
Journal:  Biophys J       Date:  2014-09-02       Impact factor: 4.033

2.  Photoinactivation of glutamate receptors by genetically encoded unnatural amino acids.

Authors:  Viktoria Klippenstein; Valentina Ghisi; Marcus Wietstruk; Andrew J R Plested
Journal:  J Neurosci       Date:  2014-01-15       Impact factor: 6.167

Review 3.  Design of cyclic peptides with biological activities from biologically active peptides: the case of peptide modulators of melanocortin receptors.

Authors:  Victor J Hruby
Journal:  Biopolymers       Date:  2016-11       Impact factor: 2.505

4.  Atomic determinants of BK channel activation by polyunsaturated fatty acids.

Authors:  Yutao Tian; Marius Aursnes; Trond Vidar Hansen; Jørn Eivind Tungen; Jason D Galpin; Lilia Leisle; Christopher A Ahern; Rong Xu; Stefan H Heinemann; Toshinori Hoshi
Journal:  Proc Natl Acad Sci U S A       Date:  2016-11-14       Impact factor: 11.205

5.  Genetically encoding a light switch in an ionotropic glutamate receptor reveals subunit-specific interfaces.

Authors:  Shujia Zhu; Morgane Riou; C Andrea Yao; Stéphanie Carvalho; Pamela C Rodriguez; Olivier Bensaude; Pierre Paoletti; Shixin Ye
Journal:  Proc Natl Acad Sci U S A       Date:  2014-04-08       Impact factor: 11.205

Review 6.  CHARMM-GUI PDB manipulator for advanced modeling and simulations of proteins containing nonstandard residues.

Authors:  Sunhwan Jo; Xi Cheng; Shahidul M Islam; Lei Huang; Huan Rui; Allen Zhu; Hui Sun Lee; Yifei Qi; Wei Han; Kenno Vanommeslaeghe; Alexander D MacKerell; Benoît Roux; Wonpil Im
Journal:  Adv Protein Chem Struct Biol       Date:  2014-08-24       Impact factor: 3.507

Review 7.  Incorporation of Non-Canonical Amino Acids.

Authors:  Lilia Leisle; Francis Valiyaveetil; Ryan A Mehl; Christopher A Ahern
Journal:  Adv Exp Med Biol       Date:  2015       Impact factor: 2.622

8.  Engineering the glutamate transporter homologue GltPh using protein semisynthesis.

Authors:  Paul J Focke; Alvin W Annen; Francis I Valiyaveetil
Journal:  Biochemistry       Date:  2015-02-17       Impact factor: 3.162

Review 9.  In vivo incorporation of non-canonical amino acids by using the chemical aminoacylation strategy: a broadly applicable mechanistic tool.

Authors:  Dennis A Dougherty; Ethan B Van Arnam
Journal:  Chembiochem       Date:  2014-07-02       Impact factor: 3.164

10.  AUTOMATED FORCE FIELD PARAMETERIZATION FOR NON-POLARIZABLE AND POLARIZABLE ATOMIC MODELS BASED ON AB INITIO TARGET DATA.

Authors:  Lei Huang; Benoît Roux
Journal:  J Chem Theory Comput       Date:  2013-08-13       Impact factor: 6.006

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