Literature DB >> 23288358

Releasing the brakes on a chromatin-remodeling enzyme.

Benjamin J Manning1, Craig L Peterson.   

Abstract

Chromatin-remodeling enzymes use the energy from ATP hydrolysis to mobilize, disrupt or change the histone composition of nucleosomes, facilitating nearly every nuclear event. Two recent studies indicate that remodeling enzymes harness the power of an ancient constitutively active DNA translocase and that different remodeling enzymes may use specialized coupling domains that communicate the presence of nucleosomal epitopes to regulate translocase and remodeling activity.

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Year:  2013        PMID: 23288358     DOI: 10.1038/nsmb.2482

Source DB:  PubMed          Journal:  Nat Struct Mol Biol        ISSN: 1545-9985            Impact factor:   15.369


  21 in total

1.  Crystal structure and functional analysis of a nucleosome recognition module of the remodeling factor ISWI.

Authors:  Tim Grüne; Jan Brzeski; Anton Eberharter; Cedric R Clapier; Davide F V Corona; Peter B Becker; Christoph W Müller
Journal:  Mol Cell       Date:  2003-08       Impact factor: 17.970

Review 2.  The SANT domain: a unique histone-tail-binding module?

Authors:  Laurie A Boyer; Robert R Latek; Craig L Peterson
Journal:  Nat Rev Mol Cell Biol       Date:  2004-02       Impact factor: 94.444

3.  Functional role of extranucleosomal DNA and the entry site of the nucleosome in chromatin remodeling by ISW2.

Authors:  Martin Zofall; Jim Persinger; Blaine Bartholomew
Journal:  Mol Cell Biol       Date:  2004-11       Impact factor: 4.272

4.  Chromatin remodeling by ISW2 and SWI/SNF requires DNA translocation inside the nucleosome.

Authors:  Martin Zofall; Jim Persinger; Stefan R Kassabov; Blaine Bartholomew
Journal:  Nat Struct Mol Biol       Date:  2006-03-05       Impact factor: 15.369

5.  Dependency of ISW1a chromatin remodeling on extranucleosomal DNA.

Authors:  Vamsi K Gangaraju; Blaine Bartholomew
Journal:  Mol Cell Biol       Date:  2007-02-05       Impact factor: 4.272

6.  Identification of residues in chromodomain helicase DNA-binding protein 1 (Chd1) required for coupling ATP hydrolysis to nucleosome sliding.

Authors:  Ashok Patel; Jeffrey N McKnight; Pavol Genzor; Gregory D Bowman
Journal:  J Biol Chem       Date:  2011-10-28       Impact factor: 5.157

7.  Histone tails modulate nucleosome mobility and regulate ATP-dependent nucleosome sliding by NURF.

Authors:  A Hamiche; J G Kang; C Dennis; H Xiao; C Wu
Journal:  Proc Natl Acad Sci U S A       Date:  2001-11-27       Impact factor: 11.205

8.  A nucleosome interaction module is required for normal function of Arabidopsis thaliana BRAHMA.

Authors:  S Farrona; L Hurtado; J C Reyes
Journal:  J Mol Biol       Date:  2007-07-21       Impact factor: 5.469

9.  A new, highly conserved domain in Swi2/Snf2 is required for SWI/SNF remodeling.

Authors:  Payel Sen; Sujana Ghosh; B Franklin Pugh; Blaine Bartholomew
Journal:  Nucleic Acids Res       Date:  2011-08-10       Impact factor: 16.971

10.  Identification of multiple distinct Snf2 subfamilies with conserved structural motifs.

Authors:  Andrew Flaus; David M A Martin; Geoffrey J Barton; Tom Owen-Hughes
Journal:  Nucleic Acids Res       Date:  2006-05-31       Impact factor: 16.971

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  7 in total

1.  Transcriptional profiling of epigenetic regulators in somatic embryos during temperature induced formation of an epigenetic memory in Norway spruce.

Authors:  Igor A Yakovlev; Elena Carneros; YeonKyeong Lee; Jorunn E Olsen; Carl Gunnar Fossdal
Journal:  Planta       Date:  2016-02-19       Impact factor: 4.116

2.  Interdomain Communication of the Chd1 Chromatin Remodeler across the DNA Gyres of the Nucleosome.

Authors:  Ilana M Nodelman; Franziska Bleichert; Ashok Patel; Ren Ren; Kyle C Horvath; James M Berger; Gregory D Bowman
Journal:  Mol Cell       Date:  2017-01-19       Impact factor: 17.970

3.  Structure and regulation of the chromatin remodeller ISWI.

Authors:  Lijuan Yan; Li Wang; Yuanyuan Tian; Xian Xia; Zhucheng Chen
Journal:  Nature       Date:  2016-12-05       Impact factor: 49.962

Review 4.  Chromatin dynamics: interplay between remodeling enzymes and histone modifications.

Authors:  Sarah G Swygert; Craig L Peterson
Journal:  Biochim Biophys Acta       Date:  2014-02-28

Review 5.  Regulation of ISWI chromatin remodelling activity.

Authors:  Maria Toto; Giulia D'Angelo; Davide F V Corona
Journal:  Chromosoma       Date:  2014-01-12       Impact factor: 4.316

6.  Identifying Cell Cycle Modulators That Selectively Target ARID1A Deficiency Using High-Throughput Image-Based Screening.

Authors:  Lihong Zhang; Jianfeng Shen; Yuping Yin; Yang Peng; Lulu Wang; Hui-Ju Hsieh; Qian Shen; Powel H Brown; Kaixiong Tao; Ivan P Uray; Guang Peng
Journal:  SLAS Discov       Date:  2017-03-15       Impact factor: 3.341

7.  SMARCAD1 Phosphorylation and Ubiquitination Are Required for Resection during DNA Double-Strand Break Repair.

Authors:  Sharmistha Chakraborty; Raj K Pandita; Shashank Hambarde; Abid R Mattoo; Vijaya Charaka; Kazi M Ahmed; Swaminathan P Iyer; Clayton R Hunt; Tej K Pandita
Journal:  iScience       Date:  2018-04-27
  7 in total

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