Literature DB >> 23286135

Dominant component analysis of electrophysiological connectivity networks.

Yasser Ghanbari1, Luke Bloy, Kayhan Batmanghelich, Timothy P L Roberts, Ragini Verma.   

Abstract

Connectivity matrices obtained from various modalities (DTI, MEG and fMRI) provide a unique insight into brain processes. Their high dimensionality necessitates the development of methods for population-based statistics, in the face of small sample sizes. In this paper, we present such a method applicable to functional connectivity networks, based on identifying the basis of dominant connectivity components that characterize the patterns of brain pathology and population variation. Projection of individual connectivity matrices into this basis allows for dimensionality reduction, facilitating subsequent statistical analysis. We find dominant components for a collection of connectivity matrices by using the projective non-negative component analysis technique which ensures that the components have non-negative elements and are non-negatively combined to obtain individual subject networks, facilitating interpretation. We demonstrate the feasibility of our novel framework by applying it to simulated connectivity matrices as well as to a clinical study using connectivity matrices derived from resting state magnetoencephalography (MEG) data in a population of subjects diagnosed with autism spectrum disorder (ASD).

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Year:  2012        PMID: 23286135      PMCID: PMC4029114          DOI: 10.1007/978-3-642-33454-2_29

Source DB:  PubMed          Journal:  Med Image Comput Comput Assist Interv


  10 in total

1.  Independent component analysis: algorithms and applications.

Authors:  A Hyvärinen; E Oja
Journal:  Neural Netw       Date:  2000 May-Jun

2.  A method for making group inferences from functional MRI data using independent component analysis.

Authors:  V D Calhoun; T Adali; G D Pearlson; J J Pekar
Journal:  Hum Brain Mapp       Date:  2001-11       Impact factor: 5.038

3.  Linear and nonlinear projective nonnegative matrix factorization.

Authors:  Zhirong Yang; Erkki Oja
Journal:  IEEE Trans Neural Netw       Date:  2010-03-25

4.  A big-world network in ASD: dynamical connectivity analysis reflects a deficit in long-range connections and an excess of short-range connections.

Authors:  Pablo Barttfeld; Bruno Wicker; Sebastián Cukier; Silvana Navarta; Sergio Lew; Mariano Sigman
Journal:  Neuropsychologia       Date:  2010-11-24       Impact factor: 3.139

5.  Synchronization likelihood with explicit time-frequency priors.

Authors:  T Montez; K Linkenkaer-Hansen; B W van Dijk; C J Stam
Journal:  Neuroimage       Date:  2006-10-03       Impact factor: 6.556

Review 6.  Brain connectivity and high functioning autism: a promising path of research that needs refined models, methodological convergence, and stronger behavioral links.

Authors:  Marlies E Vissers; Michael X Cohen; Hilde M Geurts
Journal:  Neurosci Biobehav Rev       Date:  2011-09-24       Impact factor: 8.989

7.  Generative-discriminative basis learning for medical imaging.

Authors:  Nematollah K Batmanghelich; Ben Taskar; Christos Davatzikos
Journal:  IEEE Trans Med Imaging       Date:  2011-07-25       Impact factor: 10.048

8.  Extracting biomarkers of autism from MEG resting-state functional connectivity networks.

Authors:  Vassilis Tsiaras; Panagiotis G Simos; Roozbeh Rezaie; Bhavin R Sheth; Eleftherios Garyfallidis; Eduardo M Castillo; Andrew C Papanicolaou
Journal:  Comput Biol Med       Date:  2011-05-17       Impact factor: 4.589

9.  Brain connectivity is not only lower but different in schizophrenia: a combined anatomical and functional approach.

Authors:  Pawel Skudlarski; Kanchana Jagannathan; Karen Anderson; Michael C Stevens; Vince D Calhoun; Beata A Skudlarska; Godfrey Pearlson
Journal:  Biol Psychiatry       Date:  2010-05-23       Impact factor: 13.382

10.  Modulation of temporally coherent brain networks estimated using ICA at rest and during cognitive tasks.

Authors:  Vince D Calhoun; Kent A Kiehl; Godfrey D Pearlson
Journal:  Hum Brain Mapp       Date:  2008-07       Impact factor: 5.038

  10 in total
  4 in total

1.  Locality preserving non-negative basis learning with graph embedding.

Authors:  Yasser Ghanbari; John Herrington; Ruben C Gur; Robert T Schultz; Ragini Verma
Journal:  Inf Process Med Imaging       Date:  2013

2.  Connectivity subnetwork learning for pathology and developmental variations.

Authors:  Yasser Ghanbari; Alex R Smith; Robert T Schultz; Ragini Verma
Journal:  Med Image Comput Comput Assist Interv       Date:  2013

3.  Finding imaging patterns of structural covariance via Non-Negative Matrix Factorization.

Authors:  Aristeidis Sotiras; Susan M Resnick; Christos Davatzikos
Journal:  Neuroimage       Date:  2014-12-12       Impact factor: 6.556

4.  Atypical Bilateral Brain Synchronization in the Early Stage of Human Voice Auditory Processing in Young Children with Autism.

Authors:  Toshiharu Kurita; Mitsuru Kikuchi; Yuko Yoshimura; Hirotoshi Hiraishi; Chiaki Hasegawa; Tetsuya Takahashi; Tetsu Hirosawa; Naoki Furutani; Haruhiro Higashida; Takashi Ikeda; Kouhei Mutou; Minoru Asada; Yoshio Minabe
Journal:  PLoS One       Date:  2016-04-13       Impact factor: 3.240

  4 in total

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