Literature DB >> 23284509

3-Ethyl-3-hy-droxy-8-meth-oxy-quinoline-2,4(1H,3H)-dione monohydrate.

Stanislav Kafka1, Andrej Pevec, Karel Proisl, Roman Kimmel, Janez Košmrlj.   

Abstract

In the title hydrate, C(12)H(13)NO(4)·H(2)O, the piperidine ring that is fused to the benzene ring is in a sofa conformation with the chiral C atom lying 0.4084 (18) Å out of the plane of the nine fused-ring atoms. In the crystal, O-H⋯O and N-H⋯O hydrogen bonds link the organic mol-ecules and water mol-ecules into chains running along the b-axis direction. The chains are further connected into layers parallel to the bc plane by π-π inter-actions between inversion-related benzene rings [centroid-centroid distance = 3.8846 (9) Å].

Entities:  

Year:  2012        PMID: 23284509      PMCID: PMC3515289          DOI: 10.1107/S1600536812043280

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For methods of preparation of 3-alkyl- or 3-aryl-3-hy­droxy­quinoline-2,4-diones by oxidation of the corresponding 3-alkyl- or 3-aryl­quinolin-2-ones, see: Stadlbauer & Kappe (1982 ▶); Stadlbauer et al. (1992 ▶). For naturally occurring 3-hy­droxy­quinoline-2,4-diones, see: Neuenhaus & Budzikiewicz (1979 ▶); Luo et al. (2009 ▶). For the biological activity of 3-hy­droxy­quinoline-2,4-diones, see: Prisyazhnyuk et al. (1984 ▶); Luo et al. (2009 ▶). For a related structure, see: Kafka et al. (2012 ▶).

Experimental

Crystal data

C12H13NO4·H2O M = 253.25 Orthorhombic, a = 16.5055 (4) Å b = 8.8068 (2) Å c = 16.6690 (4) Å V = 2423.02 (10) Å3 Z = 8 Mo Kα radiation μ = 0.11 mm−1 T = 293 K 0.50 × 0.25 × 0.20 mm

Data collection

Nonius KappaCCD area-detector diffractometer Absorption correction: multi-scan (SCALEPACK; Otwinowski & Minor, 1997 ▶) T min = 0.948, T max = 0.979 5200 measured reflections 2779 independent reflections 1963 reflections with I > 2σ(I) R int = 0.019

Refinement

R[F 2 > 2σ(F 2)] = 0.044 wR(F 2) = 0.127 S = 1.03 2779 reflections 175 parameters 3 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.26 e Å−3 Δρmin = −0.23 e Å−3 Data collection: COLLECT (Nonius, 1998 ▶); cell refinement: DENZO and SCALEPACK (Otwinowski & Minor, 1997 ▶); data reduction: DENZO and SCALEPACK; program(s) used to solve structure: SIR92 (Altomare et al., 1994 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2009) ▶ and DIAMOND (Brandenburg, 1999 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Click here for additional data file. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812043280/tk5162sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812043280/tk5162Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536812043280/tk5162Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C12H13NO4·H2ODx = 1.388 Mg m3
Mr = 253.25Melting point = 371–372 K
Orthorhombic, PbcaMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ac 2abCell parameters from 3161 reflections
a = 16.5055 (4) Åθ = 1.0–27.5°
b = 8.8068 (2) ŵ = 0.11 mm1
c = 16.6690 (4) ÅT = 293 K
V = 2423.02 (10) Å3Prism, yellow
Z = 80.50 × 0.25 × 0.20 mm
F(000) = 1072
Nonius KappaCCD area-detector diffractometer2779 independent reflections
Radiation source: fine-focus sealed tube1963 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.019
φ scans + ω scansθmax = 27.5°, θmin = 3.4°
Absorption correction: multi-scan (SCALEPACK; Otwinowski & Minor, 1997)h = −21→21
Tmin = 0.948, Tmax = 0.979k = −11→11
5200 measured reflectionsl = −21→21
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.044Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.127H atoms treated by a mixture of independent and constrained refinement
S = 1.03w = 1/[σ2(Fo2) + (0.0662P)2 + 0.4669P] where P = (Fo2 + 2Fc2)/3
2779 reflections(Δ/σ)max = 0.0001
175 parametersΔρmax = 0.26 e Å3
3 restraintsΔρmin = −0.23 e Å3
Experimental. 211 frames in 4 sets of φ scans + ω scans. Rotation/frame = 2 °. Crystal-detector distance = 31 mm. Measuring time = 20 s/°.
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.08014 (8)0.56475 (12)0.75104 (6)0.0505 (3)
O20.04557 (8)0.18242 (13)0.56925 (8)0.0576 (4)
O30.05871 (8)0.26982 (13)0.72594 (7)0.0527 (3)
H30.03590.19650.70580.079*
O40.14902 (8)0.81485 (13)0.51080 (7)0.0542 (3)
N10.11348 (8)0.61105 (15)0.62211 (7)0.0395 (3)
H1N0.1065 (10)0.7068 (16)0.6299 (11)0.047*
C10.09586 (9)0.51728 (17)0.68405 (8)0.0374 (3)
C20.10269 (9)0.34757 (17)0.66669 (9)0.0392 (4)
C30.07607 (9)0.30617 (16)0.58203 (10)0.0408 (4)
C40.09477 (9)0.41692 (17)0.51912 (9)0.0381 (3)
C50.09051 (10)0.3782 (2)0.43780 (10)0.0481 (4)
H50.07770.27950.42270.058*
C60.10534 (11)0.4863 (2)0.38047 (10)0.0527 (4)
H60.10230.46080.32640.063*
C70.12485 (10)0.6336 (2)0.40285 (9)0.0492 (4)
H70.13440.70620.36340.059*
C80.13022 (9)0.67423 (18)0.48253 (9)0.0410 (4)
C90.11398 (9)0.56549 (17)0.54186 (8)0.0358 (3)
C100.19372 (10)0.3023 (2)0.67026 (10)0.0523 (4)
H10A0.19860.19500.65810.063*
H10B0.22280.35790.62910.063*
C110.23315 (12)0.3326 (3)0.74990 (11)0.0683 (6)
H11A0.20350.28170.79150.102*
H11B0.23330.43990.76020.102*
H11C0.28790.29570.74900.102*
C120.16490 (14)0.9320 (2)0.45424 (12)0.0670 (6)
H12A0.11790.94770.42140.101*
H12B0.20990.90330.42100.101*
H12C0.17771.02430.48220.101*
O1W0.06321 (11)0.90745 (16)0.66799 (10)0.0752 (5)
H1W0.0478 (14)0.978 (3)0.6301 (13)0.090*
H2W0.0132 (11)0.900 (3)0.6914 (14)0.090*
U11U22U33U12U13U23
O10.0709 (8)0.0477 (7)0.0329 (6)0.0008 (5)0.0073 (5)−0.0009 (5)
O20.0692 (8)0.0379 (6)0.0657 (8)−0.0052 (5)−0.0121 (6)−0.0034 (5)
O30.0674 (8)0.0436 (6)0.0472 (7)−0.0100 (6)0.0055 (6)0.0084 (5)
O40.0786 (9)0.0454 (6)0.0386 (6)−0.0116 (6)0.0060 (6)0.0066 (5)
N10.0543 (8)0.0341 (6)0.0301 (6)−0.0024 (5)0.0009 (5)−0.0008 (5)
C10.0403 (8)0.0402 (8)0.0318 (7)0.0000 (6)0.0002 (6)0.0013 (6)
C20.0440 (8)0.0380 (8)0.0357 (8)0.0022 (6)0.0002 (6)0.0046 (6)
C30.0398 (8)0.0368 (8)0.0457 (9)0.0065 (6)−0.0034 (7)−0.0034 (6)
C40.0369 (7)0.0427 (8)0.0346 (7)0.0054 (6)−0.0030 (6)−0.0040 (6)
C50.0512 (9)0.0533 (10)0.0399 (9)0.0082 (8)−0.0058 (7)−0.0118 (7)
C60.0588 (10)0.0682 (11)0.0312 (8)0.0108 (9)−0.0013 (7)−0.0079 (8)
C70.0531 (9)0.0626 (11)0.0319 (8)0.0079 (8)0.0049 (7)0.0053 (7)
C80.0429 (8)0.0451 (9)0.0349 (8)0.0033 (6)0.0040 (6)0.0024 (7)
C90.0360 (7)0.0418 (8)0.0295 (7)0.0037 (6)−0.0001 (6)0.0000 (6)
C100.0496 (9)0.0584 (10)0.0490 (10)0.0130 (8)−0.0069 (8)0.0009 (8)
C110.0583 (11)0.0913 (16)0.0553 (11)0.0106 (11)−0.0155 (9)−0.0012 (10)
C120.0872 (15)0.0552 (11)0.0587 (12)−0.0077 (10)0.0127 (10)0.0164 (9)
O1W0.0992 (11)0.0548 (8)0.0715 (10)0.0047 (8)0.0365 (9)0.0061 (7)
O1—C11.2202 (17)C6—C71.388 (3)
O2—C31.2193 (19)C6—H60.9300
O3—C21.4040 (18)C7—C81.378 (2)
O3—H30.8200C7—H70.9300
O4—C81.361 (2)C8—C91.402 (2)
O4—C121.422 (2)C10—C111.502 (2)
N1—C11.3537 (19)C10—H10A0.9700
N1—C91.3966 (18)C10—H10B0.9700
N1—H1N0.861 (14)C11—H11A0.9600
C1—C21.527 (2)C11—H11B0.9600
C2—C31.522 (2)C11—H11C0.9600
C2—C101.555 (2)C12—H12A0.9600
C3—C41.465 (2)C12—H12B0.9600
C4—C91.399 (2)C12—H12C0.9600
C4—C51.399 (2)O1W—H1W0.923 (16)
C5—C61.371 (3)O1W—H2W0.916 (16)
C5—H50.9300
C2—O3—H3109.5C8—C7—H7119.5
C8—O4—C12118.23 (14)C6—C7—H7119.5
C1—N1—C9123.82 (13)O4—C8—C7125.75 (15)
C1—N1—H1N117.0 (12)O4—C8—C9114.89 (13)
C9—N1—H1N115.2 (12)C7—C8—C9119.34 (15)
O1—C1—N1122.32 (14)N1—C9—C4121.80 (13)
O1—C1—C2121.64 (13)N1—C9—C8118.71 (13)
N1—C1—C2115.90 (12)C4—C9—C8119.41 (13)
O3—C2—C3112.71 (13)C11—C10—C2114.01 (15)
O3—C2—C1107.81 (12)C11—C10—H10A108.8
C3—C2—C1112.89 (12)C2—C10—H10A108.8
O3—C2—C10110.35 (13)C11—C10—H10B108.8
C3—C2—C10104.65 (12)C2—C10—H10B108.8
C1—C2—C10108.35 (13)H10A—C10—H10B107.6
O2—C3—C4123.84 (15)C10—C11—H11A109.5
O2—C3—C2119.69 (14)C10—C11—H11B109.5
C4—C3—C2116.32 (13)H11A—C11—H11B109.5
C9—C4—C5120.10 (14)C10—C11—H11C109.5
C9—C4—C3118.46 (13)H11A—C11—H11C109.5
C5—C4—C3121.38 (14)H11B—C11—H11C109.5
C6—C5—C4119.83 (16)O4—C12—H12A109.5
C6—C5—H5120.1O4—C12—H12B109.5
C4—C5—H5120.1H12A—C12—H12B109.5
C5—C6—C7120.20 (15)O4—C12—H12C109.5
C5—C6—H6119.9H12A—C12—H12C109.5
C7—C6—H6119.9H12B—C12—H12C109.5
C8—C7—C6121.09 (16)H1W—O1W—H2W95 (2)
C9—N1—C1—O1−165.15 (15)C4—C5—C6—C70.2 (2)
C9—N1—C1—C219.1 (2)C5—C6—C7—C80.4 (3)
O1—C1—C2—O322.8 (2)C12—O4—C8—C7−0.1 (3)
N1—C1—C2—O3−161.35 (13)C12—O4—C8—C9−178.93 (16)
O1—C1—C2—C3147.98 (15)C6—C7—C8—O4179.85 (16)
N1—C1—C2—C3−36.19 (18)C6—C7—C8—C9−1.4 (2)
O1—C1—C2—C10−96.60 (17)C1—N1—C9—C40.9 (2)
N1—C1—C2—C1079.22 (16)C1—N1—C9—C8177.65 (14)
O3—C2—C3—O2−26.4 (2)C5—C4—C9—N1175.61 (14)
C1—C2—C3—O2−148.87 (14)C3—C4—C9—N1−1.8 (2)
C10—C2—C3—O293.51 (17)C5—C4—C9—C8−1.1 (2)
O3—C2—C3—C4157.87 (13)C3—C4—C9—C8−178.52 (14)
C1—C2—C3—C435.42 (18)O4—C8—C9—N13.8 (2)
C10—C2—C3—C4−82.20 (16)C7—C8—C9—N1−175.08 (14)
O2—C3—C4—C9167.10 (15)O4—C8—C9—C4−179.40 (14)
C2—C3—C4—C9−17.4 (2)C7—C8—C9—C41.7 (2)
O2—C3—C4—C5−10.3 (2)O3—C2—C10—C11−58.1 (2)
C2—C3—C4—C5165.20 (14)C3—C2—C10—C11−179.62 (16)
C9—C4—C5—C60.1 (2)C1—C2—C10—C1159.70 (19)
C3—C4—C5—C6177.47 (15)
D—H···AD—HH···AD···AD—H···A
O3—H3···O1i0.822.352.9430 (17)130
N1—H1N···O1W0.86 (1)2.01 (2)2.8438 (19)163 (2)
O1W—H1W···O2ii0.92 (2)2.07 (2)2.9425 (19)158 (2)
O1W—H2W···O3iii0.92 (2)2.15 (2)2.9401 (19)144 (2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O3—H3⋯O1i 0.822.352.9430 (17)130
N1—H1N⋯O1W 0.86 (1)2.01 (2)2.8438 (19)163 (2)
O1W—H1W⋯O2ii 0.92 (2)2.07 (2)2.9425 (19)158 (2)
O1W—H2W⋯O3iii 0.92 (2)2.15 (2)2.9401 (19)144 (2)

Symmetry codes: (i) ; (ii) ; (iii) .

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