Literature DB >> 23283723

Trapping cardiac recessive mutants via expression-based insertional mutagenesis screening.

Yonghe Ding1, Weibin Liu, Yun Deng, Beninio Jomok, Jingchun Yang, Wei Huang, Karl J Clark, Tao P Zhong, Xueying Lin, Stephen C Ekker, Xiaolei Xu.   

Abstract

RATIONALE: Mutagenesis screening is a powerful genetic tool for probing biological mechanisms underlying vertebrate development and human diseases. However, the increased colony management efforts in vertebrates impose a significant challenge for identifying genes affecting a particular organ, such as the heart, especially those exhibiting adult phenotypes on depletion.
OBJECTIVE: We aim to develop a facile approach that streamlines colony management efforts via enriching cardiac mutants, which enables us to screen for adult phenotypes. METHODS AND
RESULTS: The transparency of the zebrafish embryos enabled us to score 67 stable transgenic lines generated from an insertional mutagenesis screen using a transposon-based protein trapping vector. Fifteen lines with cardiac monomeric red fluorescent protein reporter expression were identified. We defined the molecular nature for 10 lines and bred them to homozygosity, which led to the identification of 1 embryonic lethal, 1 larval lethal, and 1 adult recessive mutant exhibiting cardiac hypertrophy at 1 year of age. Further characterization of these mutants uncovered an essential function of methionine adenosyltransferase II, α a (mat2aa) in cardiogenesis, an essential function of mitochondrial ribosomal protein S18B (mrps18b) in cardiac mitochondrial homeostasis, as well as a function of DnaJ (Hsp40) homolog, subfamily B, member 6b (dnajb6b) in adult cardiac hypertrophy.
CONCLUSIONS: We demonstrate that transposon-based gene trapping is an efficient approach for identifying both embryonic and adult recessive mutants with cardiac expression. The generation of a zebrafish insertional cardiac mutant collection shall facilitate the annotation of a vertebrate cardiac genome, as well as enable heart-based adult screens.

Entities:  

Mesh:

Substances:

Year:  2013        PMID: 23283723      PMCID: PMC3603352          DOI: 10.1161/CIRCRESAHA.112.300603

Source DB:  PubMed          Journal:  Circ Res        ISSN: 0009-7330            Impact factor:   17.367


  34 in total

1.  Efficient genome-wide mutagenesis of zebrafish genes by retroviral insertions.

Authors:  Dongmei Wang; Li-En Jao; Naizhong Zheng; Kyle Dolan; Jessica Ivey; Seth Zonies; Xiaolin Wu; Kangmai Wu; Hongbo Yang; Qingchao Meng; Zuoyan Zhu; Bo Zhang; Shuo Lin; Shawn M Burgess
Journal:  Proc Natl Acad Sci U S A       Date:  2007-07-18       Impact factor: 11.205

2.  Cardiovascular GO annotation initiative year 1 report: why cardiovascular GO?

Authors:  Ruth C Lovering; Emily Dimmer; Varsha K Khodiyar; Daniel G Barrell; Peter Scambler; Mike Hubank; Rolf Apweiler; Philippa J Talmud
Journal:  Proteomics       Date:  2008-05       Impact factor: 3.984

3.  The expanding role of mouse genetics for understanding human biology and disease.

Authors:  Duc Nguyen; Tian Xu
Journal:  Dis Model Mech       Date:  2008 Jul-Aug       Impact factor: 5.758

4.  Inhibition of methionine adenosyltransferase II induces FasL expression, Fas-DISC formation and caspase-8-dependent apoptotic death in T leukemic cells.

Authors:  Tanvi S Jani; Leila Gobejishvili; Prachi T Hote; Aditya S Barve; Swati Joshi-Barve; Giorgi Kharebava; Jill Suttles; Theresa Chen; Craig J McClain; Shirish Barve
Journal:  Cell Res       Date:  2009-03       Impact factor: 25.617

5.  An N-ethyl-N-nitrosourea mutagenesis recessive screen identifies two candidate regions for murine cardiomyopathy that map to chromosomes 1 and 15.

Authors:  Liliana Fernandez; Douglas A Marchuk; Jennifer L Moran; David R Beier; Howard A Rockman
Journal:  Mamm Genome       Date:  2009-04-23       Impact factor: 2.957

6.  Insertional mutagenesis by the Tol2 transposon-mediated enhancer trap approach generated mutations in two developmental genes: tcf7 and synembryn-like.

Authors:  Saori Nagayoshi; Eriko Hayashi; Gembu Abe; Naoki Osato; Kazuhide Asakawa; Akihiro Urasaki; Kazuki Horikawa; Kazuho Ikeo; Hiroyuki Takeda; Koichi Kawakami
Journal:  Development       Date:  2008-01       Impact factor: 6.868

Review 7.  The functional annotation of mammalian genomes: the challenge of phenotyping.

Authors:  Steve D M Brown; Wolfgang Wurst; Ralf Kühn; John M Hancock
Journal:  Annu Rev Genet       Date:  2009       Impact factor: 16.830

8.  Unexpected novel relational links uncovered by extensive developmental profiling of nuclear receptor expression.

Authors:  Stéphanie Bertrand; Bernard Thisse; Raquel Tavares; Laurent Sachs; Arnaud Chaumot; Pierre-Luc Bardet; Héctor Escrivà; Maryline Duffraisse; Oriane Marchand; Rachid Safi; Christine Thisse; Vincent Laudet
Journal:  PLoS Genet       Date:  2007-11       Impact factor: 5.917

9.  Large isoform of MRJ (DNAJB6) reduces malignant activity of breast cancer.

Authors:  Aparna Mitra; Rebecca A Fillmore; Brandon J Metge; Mathur Rajesh; Yaguang Xi; Judy King; Jingfang Ju; Lewis Pannell; Lalita A Shevde; Rajeev S Samant
Journal:  Breast Cancer Res       Date:  2008-03-07       Impact factor: 6.466

10.  Cardiac hypertrophy involves both myocyte hypertrophy and hyperplasia in anemic zebrafish.

Authors:  Xiaojing Sun; Tiffany Hoage; Ping Bai; Yonghe Ding; Zhenyue Chen; Ruilin Zhang; Wei Huang; Ashad Jahangir; Barry Paw; Yi-Gang Li; Xiaolei Xu
Journal:  PLoS One       Date:  2009-08-12       Impact factor: 3.240

View more
  29 in total

1.  Novel strategies for gene trapping and insertional mutagenesis mediated by Sleeping Beauty transposon.

Authors:  Guili Song; Zongbin Cui
Journal:  Mob Genet Elements       Date:  2013-10-02

2.  Bidirectional Translation in Cardiovascular Calcification.

Authors:  Cynthia St Hilaire; Marcel Liberman; Jordan D Miller
Journal:  Arterioscler Thromb Vasc Biol       Date:  2016-03       Impact factor: 8.311

Review 3.  Phenotyping cardiomyopathy in adult zebrafish.

Authors:  Alexey V Dvornikov; Pieter P de Tombe; Xiaolei Xu
Journal:  Prog Biophys Mol Biol       Date:  2018-05-30       Impact factor: 3.667

Review 4.  Understanding cardiac sarcomere assembly with zebrafish genetics.

Authors:  Jingchun Yang; Yu-Huan Shih; Xiaolei Xu
Journal:  Anat Rec (Hoboken)       Date:  2014-09       Impact factor: 2.064

5.  Cardiac transcriptome and dilated cardiomyopathy genes in zebrafish.

Authors:  Yu-Huan Shih; Yuji Zhang; Yonghe Ding; Christian A Ross; Hu Li; Timothy M Olson; Xiaolei Xu
Journal:  Circ Cardiovasc Genet       Date:  2015-01-11

6.  A modifier screen identifies DNAJB6 as a cardiomyopathy susceptibility gene.

Authors:  Yonghe Ding; Pamela A Long; J Martijn Bos; Yu-Huan Shih; Xiao Ma; Rhianna S Sundsbak; Jianhua Chen; Yiwen Jiang; Liqun Zhao; Xinyang Hu; Jianan Wang; Yongyong Shi; Michael J Ackerman; Xueying Lin; Stephen C Ekker; Margaret M Redfield; Timothy M Olson; Xiaolei Xu
Journal:  JCI Insight       Date:  2016-09-08

Review 7.  New model systems to illuminate thyroid organogenesis. Part I: an update on the zebrafish toolbox.

Authors:  Robert Opitz; Francesco Antonica; Sabine Costagliola
Journal:  Eur Thyroid J       Date:  2013-12-03

8.  MAT2A mutations predispose individuals to thoracic aortic aneurysms.

Authors:  Dong-chuan Guo; Limin Gong; Ellen S Regalado; Regie L Santos-Cortez; Ren Zhao; Bo Cai; Sudha Veeraraghavan; Siddharth K Prakash; Ralph J Johnson; Ann Muilenburg; Marcia Willing; Guillaume Jondeau; Catherine Boileau; Hariyadarshi Pannu; Rocio Moran; Julie Debacker; Michael J Bamshad; Jay Shendure; Deborah A Nickerson; Suzanne M Leal; C S Raman; Eric C Swindell; Dianna M Milewicz
Journal:  Am J Hum Genet       Date:  2014-12-31       Impact factor: 11.025

Review 9.  LITTLE FISH, BIG DATA: ZEBRAFISH AS A MODEL FOR CARDIOVASCULAR AND METABOLIC DISEASE.

Authors:  Philipp Gut; Sven Reischauer; Didier Y R Stainier; Rima Arnaout
Journal:  Physiol Rev       Date:  2017-07-01       Impact factor: 37.312

Review 10.  Mutagenesis and phenotyping resources in zebrafish for studying development and human disease.

Authors:  Gaurav Kumar Varshney; Shawn Michael Burgess
Journal:  Brief Funct Genomics       Date:  2013-10-26       Impact factor: 4.241

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.