Literature DB >> 23274993

Detailed modes of action and biochemical characterization of endo-arabinanase from Bacillus licheniformis DSM13.

Jung-Mi Park1, Myoung-Uoon Jang, Jung-Hyun Kang, Min-Jeong Kim, So-Won Lee, Yeong Bok Song, Chul-Soo Shin, Nam Soo Han, Tae-Jip Kim.   

Abstract

An endo-arabinanase (BLABNase) gene from Bacillus licheniformis DSM13 was cloned and expressed in Escherichia coli, and the biochemical properties of its encoded enzyme were characterized. The BLABNase gene consists of a single open reading frame of 987 nucleotides that encodes 328 amino acids with a predicted molecular mass of about 36 kDa. BLABNase exhibited the highest activity against debranched α-(1,5)-arabinan in 50 mM sodium acetate buffer (pH 6.0) at 55°C. Enzymatic characterization revealed that BLABNase hydrolyzes debranched or linear arabinans with a much higher activity than branched arabinan from sugar beet. Enzymatic hydrolysis pattern analyses demonstrated BLABNase to be a typical endo-(1,5)-α-S-arabinanase (EC 3.2.1.99) that randomly cleaves the internal α-(1,5)-linked L-arabinofuranosyl residues of a branchless arabinan backbone to release arabinotriose mainly, although a small amount of arabino-oligosaccharide intermediates is also liberated. Our results indicated that BLABNase acts preferentially along with the oligosaccharides longer than arabinopentaose, thus enabling the enzymatic production of various arabino-oligosaccharides.

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Year:  2012        PMID: 23274993     DOI: 10.1007/s12275-012-2489-3

Source DB:  PubMed          Journal:  J Microbiol        ISSN: 1225-8873            Impact factor:   3.422


  15 in total

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Review 2.  Alpha-L-arabinofuranosidases: the potential applications in biotechnology.

Authors:  Mondher Th Numan; Narayan B Bhosle
Journal:  J Ind Microbiol Biotechnol       Date:  2005-12-30       Impact factor: 3.346

3.  Characterization of a thermostable endo-1,5-alpha-L-arabinanase from Caldicellulorsiruptor saccharolyticus.

Authors:  Mi-Ri Hong; Chang-Su Park; Deok-Kun Oh
Journal:  Biotechnol Lett       Date:  2009-05-21       Impact factor: 2.461

4.  Purification and characterization of thermostable endo-1,5-alpha-L-arabinase from a strain of Bacillus thermodenitrificans.

Authors:  Makoto Takao; Kana Akiyama; Takuo Sakai
Journal:  Appl Environ Microbiol       Date:  2002-04       Impact factor: 4.792

5.  Tailored catalysts for plant cell-wall degradation: redesigning the exo/endo preference of Cellvibrio japonicus arabinanase 43A.

Authors:  Mark R Proctor; Edward J Taylor; Didier Nurizzo; Johan P Turkenburg; Ruth M Lloyd; Maria Vardakou; Gideon J Davies; Harry J Gilbert
Journal:  Proc Natl Acad Sci U S A       Date:  2005-02-11       Impact factor: 11.205

6.  Purification, characterization and functional analysis of an endo-arabinanase (AbnA) from Bacillus subtilis.

Authors:  Teresa Fontes Leal; Isabel de Sá-Nogueira
Journal:  FEMS Microbiol Lett       Date:  2004-12-01       Impact factor: 2.742

7.  The complete genome sequence of Bacillus licheniformis DSM13, an organism with great industrial potential.

Authors:  Birgit Veith; Christina Herzberg; Silke Steckel; Jörg Feesche; Karl Heinz Maurer; Petra Ehrenreich; Sebastian Bäumer; Anke Henne; Heiko Liesegang; Rainer Merkl; Armin Ehrenreich; Gerhard Gottschalk
Journal:  J Mol Microbiol Biotechnol       Date:  2004

8.  Crystal structure of an inverting GH 43 1,5-alpha-L-arabinanase from Geobacillus stearothermophilus complexed with its substrate.

Authors:  Anat Alhassid; Alon Ben-David; Orly Tabachnikov; Dima Libster; Einat Naveh; Gennady Zolotnitsky; Yuval Shoham; Gil Shoham
Journal:  Biochem J       Date:  2009-07-29       Impact factor: 3.857

9.  Arabinan degrading enzymes from Aspergillus nidulans: induction and purification.

Authors:  D Ramón; P vd Veen; J Visser
Journal:  FEMS Microbiol Lett       Date:  1993-10-01       Impact factor: 2.742

10.  Cellvibrio japonicus alpha-L-arabinanase 43A has a novel five-blade beta-propeller fold.

Authors:  Didier Nurizzo; Johan P Turkenburg; Simon J Charnock; Shirley M Roberts; Eleanor J Dodson; Vincent A McKie; Edward J Taylor; Harry J Gilbert; Gideon J Davies
Journal:  Nat Struct Biol       Date:  2002-09
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  1 in total

1.  Arabinan hydrolysis by GH43 enzymes of Hungateiclostridium clariflavum and the potential synergistic mechanisms.

Authors:  Alei Geng; Meng Jin; Nana Li; Zhuowei Tu; Daochen Zhu; Rongrong Xie; Qianqian Wang; Jianzhong Sun
Journal:  Appl Microbiol Biotechnol       Date:  2022-10-17       Impact factor: 5.560

  1 in total

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