Literature DB >> 15383718

The complete genome sequence of Bacillus licheniformis DSM13, an organism with great industrial potential.

Birgit Veith1, Christina Herzberg, Silke Steckel, Jörg Feesche, Karl Heinz Maurer, Petra Ehrenreich, Sebastian Bäumer, Anke Henne, Heiko Liesegang, Rainer Merkl, Armin Ehrenreich, Gerhard Gottschalk.   

Abstract

The genome of Bacillus licheniformis DSM13 consists of a single chromosome that has a size of 4,222,748 base pairs. The average G+C ratio is 46.2%. 4,286 open reading frames, 72 tRNA genes, 7 rRNA operons and 20 transposase genes were identified. The genome shows a marked co-linearity with Bacillus subtilis but contains defined inserted regions that can be identified at the sequence as well as at the functional level. B. licheniformis DSM13 has a well-conserved secretory system, no polyketide biosynthesis, but is able to form the lipopeptide lichenysin. From the further analysis of the genome sequence, we identified conserved regulatory DNA motives, the occurrence of the glyoxylate bypass and the presence of anaerobic ribonucleotide reductase explaining that B. licheniformis is able to grow on acetate and 2,3-butanediol as well as anaerobically on glucose. Many new genes of potential interest for biotechnological applications were found in B. licheniformis; candidates include proteases, pectate lyases, lipases and various polysaccharide degrading enzymes. Copyright 2004 S. Karger AG, Basel

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Year:  2004        PMID: 15383718     DOI: 10.1159/000079829

Source DB:  PubMed          Journal:  J Mol Microbiol Biotechnol        ISSN: 1464-1801


  91 in total

1.  Cloning, expression and characterization of a metagenome derived thermoactive/thermostable pectinase.

Authors:  Rajvinder Singh; Samriti Dhawan; Kashmir Singh; Jagdeep Kaur
Journal:  Mol Biol Rep       Date:  2012-06-19       Impact factor: 2.316

2.  Novel bacterial lipoprotein structures conserved in low-GC content gram-positive bacteria are recognized by Toll-like receptor 2.

Authors:  Kenji Kurokawa; Kyoung-Hwa Ryu; Rie Ichikawa; Akiko Masuda; Min-Su Kim; Hanna Lee; Jun-Ho Chae; Takashi Shimizu; Tatsuya Saitoh; Koichi Kuwano; Shizuo Akira; Naoshi Dohmae; Hiroshi Nakayama; Bok Luel Lee
Journal:  J Biol Chem       Date:  2012-02-02       Impact factor: 5.157

3.  Single-Cell Microscopy Reveals That Levels of Cyclic di-GMP Vary among Bacillus subtilis Subpopulations.

Authors:  Cordelia A Weiss; Jakob A Hoberg; Kuanqing Liu; Benjamin P Tu; Wade C Winkler
Journal:  J Bacteriol       Date:  2019-07-24       Impact factor: 3.490

4.  Unraveling bacterial diversity in oil refinery effluents.

Authors:  Thabile Lukhele; Hlengilizwe Nyoni; Bhekie Brilliance Mamba; Titus Alfred Makudali Msagati
Journal:  Arch Microbiol       Date:  2020-10-20       Impact factor: 2.552

5.  Isolation and molecular characterization of chitinase-deficient Bacillus licheniformis strains capable of deproteinization of shrimp shell waste to obtain highly viscous chitin.

Authors:  Jens Waldeck; Gabriele Daum; Bernward Bisping; Friedhelm Meinhardt
Journal:  Appl Environ Microbiol       Date:  2006-10-06       Impact factor: 4.792

6.  Complete genome sequence of Paenibacillus mucilaginosus 3016, a bacterium functional as microbial fertilizer.

Authors:  Mingchao Ma; Zhenya Wang; Li Li; Xin Jiang; Dawei Guan; Fengming Cao; Huijun Chen; Xuan Wang; Delong Shen; Binghai Du; Jun Li
Journal:  J Bacteriol       Date:  2012-05       Impact factor: 3.490

7.  Genetic improvement of Bacillus licheniformis strains for efficient deproteinization of shrimp shells and production of high-molecular-mass chitin and chitosan.

Authors:  Kerstin Hoffmann; Gabriele Daum; Marina Köster; Werner-Michael Kulicke; Heike Meyer-Rammes; Bernward Bisping; Friedhelm Meinhardt
Journal:  Appl Environ Microbiol       Date:  2010-10-22       Impact factor: 4.792

8.  Use of single-point genome signature tags as a universal tagging method for microbial genome surveys.

Authors:  Daniel van der Lelie; Celine Lesaulnier; Sean McCorkle; Joke Geets; Safiyh Taghavi; John Dunn
Journal:  Appl Environ Microbiol       Date:  2006-03       Impact factor: 4.792

9.  Score-based prediction of genomic islands in prokaryotic genomes using hidden Markov models.

Authors:  Stephan Waack; Oliver Keller; Roman Asper; Thomas Brodag; Carsten Damm; Wolfgang Florian Fricke; Katharina Surovcik; Peter Meinicke; Rainer Merkl
Journal:  BMC Bioinformatics       Date:  2006-03-16       Impact factor: 3.169

10.  Pseudomycoicidin, a Class II Lantibiotic from Bacillus pseudomycoides.

Authors:  Shradha Basi-Chipalu; Jasmin Dischinger; Michaele Josten; Christiane Szekat; Annegret Zweynert; Hans-Georg Sahl; Gabriele Bierbaum
Journal:  Appl Environ Microbiol       Date:  2015-03-13       Impact factor: 4.792

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