Literature DB >> 23274422

Neil3, the final frontier for the DNA glycosylases that recognize oxidative damage.

Minmin Liu1, Sylvie Doublié2, Susan S Wallace3.   

Abstract

DNA glycosylases are the enzymes that initiate the Base Excision Repair (BER) process that protects all organisms from the mutagenic and/or cytotoxic effects of DNA base lesions. Endonuclease VIII like proteins (Neil1, Neil2 and Neil3) are found in vertebrate genomes and are homologous to the well-characterized bacterial DNA glycosylases, Formamidopyrimidine DNA glycosylase (Fpg) and Endonuclease VIII (Nei). Since the initial discovery of the Neil proteins, much progress has been made on characterizing Neil1 and Neil2. It was not until recently, however, that Neil3 was shown to be a functional DNA glycosylase having a different substrate specificity and unusual structural features compared with other Fpg/Nei homologs. Although the biological functions of Neil3 still remain an enigma, this review highlights recent biochemical and structural data that may ultimately shed light on its biological role.
Copyright © 2013 Elsevier B.V. All rights reserved.

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Year:  2012        PMID: 23274422      PMCID: PMC3657305          DOI: 10.1016/j.mrfmmm.2012.12.003

Source DB:  PubMed          Journal:  Mutat Res        ISSN: 0027-5107            Impact factor:   2.433


  105 in total

Review 1.  Initiation of base excision repair: glycosylase mechanisms and structures.

Authors:  A K McCullough; M L Dodson; R S Lloyd
Journal:  Annu Rev Biochem       Date:  1999       Impact factor: 23.643

2.  Structural insights into lesion recognition and repair by the bacterial 8-oxoguanine DNA glycosylase MutM.

Authors:  J Christopher Fromme; Gregory L Verdine
Journal:  Nat Struct Biol       Date:  2002-07

3.  8-oxoguanine (8-hydroxyguanine) DNA glycosylase and its substrate specificity.

Authors:  J Tchou; H Kasai; S Shibutani; M H Chung; J Laval; A P Grollman; S Nishimura
Journal:  Proc Natl Acad Sci U S A       Date:  1991-06-01       Impact factor: 11.205

4.  Preferential repair of oxidized base damage in the transcribed genes of mammalian cells.

Authors:  Dibyendu Banerjee; Santi M Mandal; Aditi Das; Muralidhar L Hegde; Soumita Das; Kishor K Bhakat; Istvan Boldogh; Partha S Sarkar; Sankar Mitra; Tapas K Hazra
Journal:  J Biol Chem       Date:  2010-12-17       Impact factor: 5.157

5.  Age-related and tissue-specific accumulation of oxidative DNA base damage in 7,8-dihydro-8-oxoguanine-DNA glycosylase (Ogg1) deficient mice.

Authors:  M Osterod; S Hollenbach; J G Hengstler; D E Barnes; T Lindahl; B Epe
Journal:  Carcinogenesis       Date:  2001-09       Impact factor: 4.944

6.  Recognition of the oxidized lesions spiroiminodihydantoin and guanidinohydantoin in DNA by the mammalian base excision repair glycosylases NEIL1 and NEIL2.

Authors:  M Katie Hailer; Peter G Slade; Brooke D Martin; Thomas A Rosenquist; Kent D Sugden
Journal:  DNA Repair (Amst)       Date:  2005-01-02

7.  AP endonuclease-independent DNA base excision repair in human cells.

Authors:  Lee Wiederhold; John B Leppard; Padmini Kedar; Feridoun Karimi-Busheri; Aghdass Rasouli-Nia; Michael Weinfeld; Alan E Tomkinson; Tadahide Izumi; Rajendra Prasad; Samuel H Wilson; Sankar Mitra; Tapas K Hazra
Journal:  Mol Cell       Date:  2004-07-23       Impact factor: 17.970

8.  Accumulation of the oxidative base lesion 8-hydroxyguanine in DNA of tumor-prone mice defective in both the Myh and Ogg1 DNA glycosylases.

Authors:  Maria Teresa Russo; Gabriele De Luca; Paolo Degan; Eleonora Parlanti; Eugenia Dogliotti; Deborah E Barnes; Tomas Lindahl; Hanjing Yang; Jeffrey H Miller; Margherita Bignami
Journal:  Cancer Res       Date:  2004-07-01       Impact factor: 12.701

9.  Analysis of loss of heterozygosity on chromosome 4q in hepatocellular carcinoma using high-throughput SNP array.

Authors:  Huakun Zhang; Haiqing Ma; Qijing Wang; Minshan Chen; Desheng Weng; Hui Wang; Jun Zhou; Yongqiang Li; Jiancong Sun; Yibing Chen; Xiaoting Liang; Jingjing Zhao; Ke Pan; Huiyun Wang; Jianchuan Xia
Journal:  Oncol Rep       Date:  2010-02       Impact factor: 3.906

10.  Repair of formamidopyrimidines in DNA involves different glycosylases: role of the OGG1, NTH1, and NEIL1 enzymes.

Authors:  Jingping Hu; Nadja C de Souza-Pinto; Kazuhiro Haraguchi; Barbara A Hogue; Pawel Jaruga; Marc M Greenberg; Miral Dizdaroglu; Vilhelm A Bohr
Journal:  J Biol Chem       Date:  2005-10-11       Impact factor: 5.157

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  40 in total

Review 1.  A role for the base excision repair enzyme NEIL3 in replication-dependent repair of interstrand DNA cross-links derived from psoralen and abasic sites.

Authors:  Zhiyu Yang; Maryam Imani Nejad; Jacqueline Gamboa Varela; Nathan E Price; Yinsheng Wang; Kent S Gates
Journal:  DNA Repair (Amst)       Date:  2017-02-20

Review 2.  DNA glycosylases search for and remove oxidized DNA bases.

Authors:  Susan S Wallace
Journal:  Environ Mol Mutagen       Date:  2013-10-07       Impact factor: 3.216

Review 3.  Base excision repair: a critical player in many games.

Authors:  Susan S Wallace
Journal:  DNA Repair (Amst)       Date:  2014-04-26

4.  NEIL1 and NEIL2 DNA glycosylases protect neural crest development against mitochondrial oxidative stress.

Authors:  Dandan Han; Lars Schomacher; Katrin M Schüle; Medhavi Mallick; Michael U Musheev; Emil Karaulanov; Laura Krebs; Annika von Seggern; Christof Niehrs
Journal:  Elife       Date:  2019-09-30       Impact factor: 8.140

Review 5.  Base Excision Repair in the Mitochondria.

Authors:  Aishwarya Prakash; Sylvie Doublié
Journal:  J Cell Biochem       Date:  2015-08       Impact factor: 4.429

6.  Unhooking of an interstrand cross-link at DNA fork structures by the DNA glycosylase NEIL3.

Authors:  Maryam Imani Nejad; Kurt Housh; Alyssa A Rodriguez; Tuhin Haldar; Scott Kathe; Susan S Wallace; Brandt F Eichman; Kent S Gates
Journal:  DNA Repair (Amst)       Date:  2019-11-20

7.  An autoinhibitory role for the GRF zinc finger domain of DNA glycosylase NEIL3.

Authors:  Alyssa A Rodriguez; Jessica L Wojtaszek; Briana H Greer; Tuhin Haldar; Kent S Gates; R Scott Williams; Brandt F Eichman
Journal:  J Biol Chem       Date:  2020-09-02       Impact factor: 5.157

8.  A genome-wide analysis of gene-caffeine consumption interaction on basal cell carcinoma.

Authors:  Xin Li; Marilyn C Cornelis; Liming Liang; Fengju Song; Immaculata De Vivo; Edward Giovannucci; Jean Y Tang; Jiali Han
Journal:  Carcinogenesis       Date:  2016-10-07       Impact factor: 4.944

9.  Replication-Dependent Unhooking of DNA Interstrand Cross-Links by the NEIL3 Glycosylase.

Authors:  Daniel R Semlow; Jieqiong Zhang; Magda Budzowska; Alexander C Drohat; Johannes C Walter
Journal:  Cell       Date:  2016-09-29       Impact factor: 41.582

10.  Base and Nucleotide Excision Repair of Oxidatively Generated Guanine Lesions in DNA.

Authors:  Vladimir Shafirovich; Konstantin Kropachev; Thomas Anderson; Zhi Liu; Marina Kolbanovskiy; Brooke D Martin; Kent Sugden; Yoonjung Shim; Xuejing Chen; Jung-Hyun Min; Nicholas E Geacintov
Journal:  J Biol Chem       Date:  2016-01-05       Impact factor: 5.157

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