Literature DB >> 12055620

Structural insights into lesion recognition and repair by the bacterial 8-oxoguanine DNA glycosylase MutM.

J Christopher Fromme1, Gregory L Verdine.   

Abstract

MutM is a bacterial 8-oxoguanine glycosylase responsible for initiating base-excision repair of oxidized guanine residues in DNA. Here we report five different crystal structures of MutM-DNA complexes that represent different steps of the repair reaction cascade catalyzed by the protein and also differ in the identity of the base opposite the lesion (the 'estranged' base). These structures reveal that the MutM active site performs the multiple steps of base-excision and 3' and 5' nicking with minimal rearrangement of the DNA backbone.

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Year:  2002        PMID: 12055620     DOI: 10.1038/nsb809

Source DB:  PubMed          Journal:  Nat Struct Biol        ISSN: 1072-8368


  65 in total

Review 1.  The formamidopyrimidines: purine lesions formed in competition with 8-oxopurines from oxidative stress.

Authors:  Marc M Greenberg
Journal:  Acc Chem Res       Date:  2011-11-11       Impact factor: 22.384

2.  Pre-steady-state kinetics shows differences in processing of various DNA lesions by Escherichia coli formamidopyrimidine-DNA glycosylase.

Authors:  Vladimir V Koval; Nikita A Kuznetsov; Dmitry O Zharkov; Alexander A Ishchenko; Kenneth T Douglas; Georgy A Nevinsky; Olga S Fedorova
Journal:  Nucleic Acids Res       Date:  2004-02-09       Impact factor: 16.971

3.  Structure of the topoisomerase VI-B subunit: implications for type II topoisomerase mechanism and evolution.

Authors:  Kevin D Corbett; James M Berger
Journal:  EMBO J       Date:  2003-01-02       Impact factor: 11.598

4.  Structure of a trapped endonuclease III-DNA covalent intermediate.

Authors:  J Christopher Fromme; Gregory L Verdine
Journal:  EMBO J       Date:  2003-07-01       Impact factor: 11.598

5.  Sequence-dependent structural variation in DNA undergoing intrahelical inspection by the DNA glycosylase MutM.

Authors:  Rou-Jia Sung; Michael Zhang; Yan Qi; Gregory L Verdine
Journal:  J Biol Chem       Date:  2012-03-30       Impact factor: 5.157

Review 6.  Regulation of DNA glycosylases and their role in limiting disease.

Authors:  Harini Sampath; Amanda K McCullough; R Stephen Lloyd
Journal:  Free Radic Res       Date:  2012-02-06

Review 7.  Repair of 8-oxoG:A mismatches by the MUTYH glycosylase: Mechanism, metals and medicine.

Authors:  Douglas M Banda; Nicole N Nuñez; Michael A Burnside; Katie M Bradshaw; Sheila S David
Journal:  Free Radic Biol Med       Date:  2017-01-10       Impact factor: 7.376

8.  Uncoupling of nucleotide flipping and DNA bending by the t4 pyrimidine dimer DNA glycosylase.

Authors:  Randall K Walker; Amanda K McCullough; R Stephen Lloyd
Journal:  Biochemistry       Date:  2006-11-28       Impact factor: 3.162

9.  A base-excision DNA-repair protein finds intrahelical lesion bases by fast sliding in contact with DNA.

Authors:  Paul C Blainey; Antoine M van Oijen; Anirban Banerjee; Gregory L Verdine; X Sunney Xie
Journal:  Proc Natl Acad Sci U S A       Date:  2006-04-03       Impact factor: 11.205

10.  Molecular simulations reveal a common binding mode for glycosylase binding of oxidatively damaged DNA lesions.

Authors:  Kun Song; Catherine Kelso; Carlos de los Santos; Arthur P Grollman; Carlos Simmerling
Journal:  J Am Chem Soc       Date:  2007-11-08       Impact factor: 15.419

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