Literature DB >> 23269372

High-resolution whole-genome haplotyping using limited seed data.

Weinian Rao, Yamin Ma, Li Ma, Jian Zhao, Qiling Li, Weikuan Gu, Kui Zhang, Vincent C Bond, Qing Song.   

Abstract

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Year:  2013        PMID： 23269372      PMCID： PMC3835542          DOI： 10.1038/nmeth.2308

Source DB:  PubMed          Journal:  Nat Methods        ISSN： 1548-7091            Impact factor:   28.547


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  6 in total

1.  Completely phased genome sequencing through chromosome sorting.

Authors:  Hong Yang; Xi Chen; Wing Hung Wong
Journal:  Proc Natl Acad Sci U S A       Date:  2010-12-15       Impact factor: 11.205

2.  One genome, two haplotypes.

Authors:  Nicole Rusk
Journal:  Nat Methods       Date:  2011-02       Impact factor: 28.547

3.  The next phase in human genetics.

Authors:  Vikas Bansal; Ryan Tewhey; Eric J Topol; Nicholas J Schork
Journal:  Nat Biotechnol       Date:  2011-01       Impact factor: 54.908

4.  Whole-genome molecular haplotyping of single cells.

Authors:  H Christina Fan; Jianbin Wang; Anastasia Potanina; Stephen R Quake
Journal:  Nat Biotechnol       Date:  2010-12-19       Impact factor: 54.908

5.  Direct determination of molecular haplotypes by chromosome microdissection.

Authors:  Li Ma; Yan Xiao; Hui Huang; Qingwei Wang; Weinian Rao; Yue Feng; Kui Zhang; Qing Song
Journal:  Nat Methods       Date:  2010-03-21       Impact factor: 28.547

6.  Haplotype-resolved genome sequencing of a Gujarati Indian individual.

Authors:  Jacob O Kitzman; Alexandra P Mackenzie; Andrew Adey; Joseph B Hiatt; Rupali P Patwardhan; Peter H Sudmant; Sarah B Ng; Can Alkan; Ruolan Qiu; Evan E Eichler; Jay Shendure
Journal:  Nat Biotechnol       Date:  2010-12-19       Impact factor: 54.908
  6 in total
  11 in total

1.  GenomeLaser: fast and accurate haplotyping from pedigree genotypes.

Authors:  Wenzhi Li; Guoxing Fu; Weinian Rao; Wei Xu; Li Ma; Shiwen Guo; Qing Song
Journal:  Bioinformatics       Date:  2015-08-18       Impact factor: 6.937

2.  FISH: fast and accurate diploid genotype imputation via segmental hidden Markov model.

Authors:  Lei Zhang; Yu-Fang Pei; Xiaoying Fu; Yong Lin; Yu-Ping Wang; Hong-Wen Deng
Journal:  Bioinformatics       Date:  2014-03-10       Impact factor: 6.937

3.  Chromosome-Range Whole-Genome High-Throughput Experimental Haplotyping by Single-Chromosome Microdissection.

Authors:  Li Ma; Wenzhi Li; Qing Song
Journal:  Methods Mol Biol       Date:  2017

4.  An accurate clone-based haplotyping method by overlapping pool sequencing.

Authors:  Cheng Li; Changchang Cao; Jing Tu; Xiao Sun
Journal:  Nucleic Acids Res       Date:  2016-04-19       Impact factor: 16.971

5.  High-accuracy haplotype imputation using unphased genotype data as the references.

Authors:  Wenzhi Li; Wei Xu; Guoxing Fu; Li Ma; Jendai Richards; Weinian Rao; Tameka Bythwood; Shiwen Guo; Qing Song
Journal:  Gene       Date:  2015-07-30       Impact factor: 3.688

6.  Admixture mapping of genetic variants for uterine fibroids.

Authors:  Kui Zhang; Howard Wiener; Brahim Aissani
Journal:  J Hum Genet       Date:  2015-06-04       Impact factor: 3.172

7.  On the design of clone-based haplotyping.

Authors:  Christine Lo; Rui Liu; Jehyuk Lee; Kimberly Robasky; Susan Byrne; Carolina Lucchesi; John Aach; George Church; Vineet Bafna; Kun Zhang
Journal:  Genome Biol       Date:  2013       Impact factor: 13.583

8.  Whole-genome haplotyping approaches and genomic medicine.

Authors:  Gustavo Glusman; Hannah C Cox; Jared C Roach
Journal:  Genome Med       Date:  2014-09-25       Impact factor: 11.117

9.  A method to evaluate genome-wide methylation in archival formalin-fixed, paraffin-embedded ovarian epithelial cells.

Authors:  Qiling Li; Min Li; Li Ma; Wenzhi Li; Xuehong Wu; Jendai Richards; Guoxing Fu; Wei Xu; Tameka Bythwood; Xu Li; Jianxin Wang; Qing Song
Journal:  PLoS One       Date:  2014-08-18       Impact factor: 3.240

10.  References for Haplotype Imputation in the Big Data Era.

Authors:  Wenzhi Li; Wei Xu; Qiling Li; Li Ma; Qing Song
Journal:  Mol Biol (Los Angel)       Date:  2015-10-31
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