Literature DB >> 21221098

The next phase in human genetics.

Vikas Bansal, Ryan Tewhey, Eric J Topol, Nicholas J Schork.   

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Year:  2011        PMID： 21221098     DOI： 10.1038/nbt.1757

Source DB:  PubMed          Journal:  Nat Biotechnol        ISSN： 1087-0156            Impact factor:   54.908


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  7 in total

1.  An MCMC algorithm for haplotype assembly from whole-genome sequence data.

Authors:  Vikas Bansal; Aaron L Halpern; Nelson Axelrod; Vineet Bafna
Journal:  Genome Res       Date:  2008-08       Impact factor: 9.043

2.  Whole-genome molecular haplotyping of single cells.

Authors:  H Christina Fan; Jianbin Wang; Anastasia Potanina; Stephen R Quake
Journal:  Nat Biotechnol       Date:  2010-12-19       Impact factor: 54.908

3.  Analysis of genetic inheritance in a family quartet by whole-genome sequencing.

Authors:  Jared C Roach; Gustavo Glusman; Arian F A Smit; Chad D Huff; Robert Hubley; Paul T Shannon; Lee Rowen; Krishna P Pant; Nathan Goodman; Michael Bamshad; Jay Shendure; Radoje Drmanac; Lynn B Jorde; Leroy Hood; David J Galas
Journal:  Science       Date:  2010-03-10       Impact factor: 47.728

4.  The diploid genome sequence of an Asian individual.

Authors:  Jun Wang; Wei Wang; Ruiqiang Li; Yingrui Li; Geng Tian; Laurie Goodman; Wei Fan; Junqing Zhang; Jun Li; Juanbin Zhang; Yiran Guo; Binxiao Feng; Heng Li; Yao Lu; Xiaodong Fang; Huiqing Liang; Zhenglin Du; Dong Li; Yiqing Zhao; Yujie Hu; Zhenzhen Yang; Hancheng Zheng; Ines Hellmann; Michael Inouye; John Pool; Xin Yi; Jing Zhao; Jinjie Duan; Yan Zhou; Junjie Qin; Lijia Ma; Guoqing Li; Zhentao Yang; Guojie Zhang; Bin Yang; Chang Yu; Fang Liang; Wenjie Li; Shaochuan Li; Dawei Li; Peixiang Ni; Jue Ruan; Qibin Li; Hongmei Zhu; Dongyuan Liu; Zhike Lu; Ning Li; Guangwu Guo; Jianguo Zhang; Jia Ye; Lin Fang; Qin Hao; Quan Chen; Yu Liang; Yeyang Su; A San; Cuo Ping; Shuang Yang; Fang Chen; Li Li; Ke Zhou; Hongkun Zheng; Yuanyuan Ren; Ling Yang; Yang Gao; Guohua Yang; Zhuo Li; Xiaoli Feng; Karsten Kristiansen; Gane Ka-Shu Wong; Rasmus Nielsen; Richard Durbin; Lars Bolund; Xiuqing Zhang; Songgang Li; Huanming Yang; Jian Wang
Journal:  Nature       Date:  2008-11-06       Impact factor: 49.962

5.  Optimal algorithms for haplotype assembly from whole-genome sequence data.

Authors:  Dan He; Arthur Choi; Knot Pipatsrisawat; Adnan Darwiche; Eleazar Eskin
Journal:  Bioinformatics       Date:  2010-06-15       Impact factor: 6.937

6.  Haplotype-resolved genome sequencing of a Gujarati Indian individual.

Authors:  Jacob O Kitzman; Alexandra P Mackenzie; Andrew Adey; Joseph B Hiatt; Rupali P Patwardhan; Peter H Sudmant; Sarah B Ng; Can Alkan; Ruolan Qiu; Evan E Eichler; Jay Shendure
Journal:  Nat Biotechnol       Date:  2010-12-19       Impact factor: 54.908

7.  The diploid genome sequence of an individual human.

Authors:  Samuel Levy; Granger Sutton; Pauline C Ng; Lars Feuk; Aaron L Halpern; Brian P Walenz; Nelson Axelrod; Jiaqi Huang; Ewen F Kirkness; Gennady Denisov; Yuan Lin; Jeffrey R MacDonald; Andy Wing Chun Pang; Mary Shago; Timothy B Stockwell; Alexia Tsiamouri; Vineet Bafna; Vikas Bansal; Saul A Kravitz; Dana A Busam; Karen Y Beeson; Tina C McIntosh; Karin A Remington; Josep F Abril; John Gill; Jon Borman; Yu-Hui Rogers; Marvin E Frazier; Stephen W Scherer; Robert L Strausberg; J Craig Venter
Journal:  PLoS Biol       Date:  2007-09-04       Impact factor: 8.029
  7 in total
  10 in total

Review 1.  Annotating individual human genomes.

Authors:  Ali Torkamani; Ashley A Scott-Van Zeeland; Eric J Topol; Nicholas J Schork
Journal:  Genomics       Date:  2011-08-02       Impact factor: 5.736

2.  A comprehensively molecular haplotype-resolved genome of a European individual.

Authors:  Eun-Kyung Suk; Gayle K McEwen; Jorge Duitama; Katja Nowick; Sabrina Schulz; Stefanie Palczewski; Stefan Schreiber; Dustin T Holloway; Stephen McLaughlin; Heather Peckham; Clarence Lee; Thomas Huebsch; Margret R Hoehe
Journal:  Genome Res       Date:  2011-08-03       Impact factor: 9.043

3.  Haplotype phasing of whole human genomes using bead-based barcode partitioning in a single tube.

Authors:  Fan Zhang; Lena Christiansen; Jerushah Thomas; Dmitry Pokholok; Ros Jackson; Natalie Morrell; Yannan Zhao; Melissa Wiley; Emily Welch; Erich Jaeger; Ana Granat; Steven J Norberg; Aaron Halpern; Maria C Rogert; Mostafa Ronaghi; Jay Shendure; Niall Gormley; Kevin L Gunderson; Frank J Steemers
Journal:  Nat Biotechnol       Date:  2017-06-26       Impact factor: 54.908

4.  High-resolution whole-genome haplotyping using limited seed data.

Authors:  Weinian Rao; Yamin Ma; Li Ma; Jian Zhao; Qiling Li; Weikuan Gu; Kui Zhang; Vincent C Bond; Qing Song
Journal:  Nat Methods       Date:  2013-01       Impact factor: 28.547

Review 5.  The importance of phase information for human genomics.

Authors:  Ryan Tewhey; Vikas Bansal; Ali Torkamani; Eric J Topol; Nicholas J Schork
Journal:  Nat Rev Genet       Date:  2011-02-08       Impact factor: 53.242

6.  Haplotype-resolved whole-genome sequencing by contiguity-preserving transposition and combinatorial indexing.

Authors:  Sasan Amini; Dmitry Pushkarev; Lena Christiansen; Emrah Kostem; Tom Royce; Casey Turk; Natasha Pignatelli; Andrew Adey; Jacob O Kitzman; Kandaswamy Vijayan; Mostafa Ronaghi; Jay Shendure; Kevin L Gunderson; Frank J Steemers
Journal:  Nat Genet       Date:  2014-10-19       Impact factor: 38.330

7.  High-accuracy haplotype imputation using unphased genotype data as the references.

Authors:  Wenzhi Li; Wei Xu; Guoxing Fu; Li Ma; Jendai Richards; Weinian Rao; Tameka Bythwood; Shiwen Guo; Qing Song
Journal:  Gene       Date:  2015-07-30       Impact factor: 3.688

8.  Targeted isolation of cloned genomic regions by recombineering for haplotype phasing and isogenic targeting.

Authors:  Marta Nedelkova; Marcello Maresca; Jun Fu; Maria Rostovskaya; Ramu Chenna; Christian Thiede; Konstantinos Anastassiadis; Mihail Sarov; A Francis Stewart
Journal:  Nucleic Acids Res       Date:  2011-08-18       Impact factor: 16.971

9.  Multiple haplotype-resolved genomes reveal population patterns of gene and protein diplotypes.

Authors:  Margret R Hoehe; George M Church; Hans Lehrach; Thomas Kroslak; Stefanie Palczewski; Katja Nowick; Sabrina Schulz; Eun-Kyung Suk; Thomas Huebsch
Journal:  Nat Commun       Date:  2014-11-26       Impact factor: 14.919

10.  Direct chromosome-length haplotyping by single-cell sequencing.

Authors:  David Porubský; Ashley D Sanders; Niek van Wietmarschen; Ester Falconer; Mark Hills; Diana C J Spierings; Marianna R Bevova; Victor Guryev; Peter M Lansdorp
Journal:  Genome Res       Date:  2016-09-19       Impact factor: 9.043
  10 in total

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