Literature DB >> 23266608

Oxidase uncoupling in heme monooxygenases: human cytochrome P450 CYP3A4 in Nanodiscs.

Yelena V Grinkova1, Ilia G Denisov, Mark A McLean, Stephen G Sligar.   

Abstract

The normal reaction mechanism of cytochrome P450 operates by utilizing two reducing equivalents to reduce atmospheric dioxygen, producing one molecule of water and an oxygenated product in an overall stoichiometry of 2 electrons:1 dioxygen:1 product. However, three alternate unproductive pathways exist where the intermediate iron-oxygen states in the catalytic cycle can yield reduced oxygen products without substrate metabolism. The first involves release of superoxide from the oxygenated intermediate while the second occurs after input of the second reducing equivalent. Superoxide rapidly dismutates and hence both processes produce hydrogen peroxide that can be cytotoxic to the organism. In both cases, the formation of hydrogen peroxide involves the same overall stoichiometry as oxygenases catalysis. The key step in the catalytic cycle of cytochrome P450 involves scission of the oxygen-oxygen bond of atmospheric dioxygen to produce a higher valent iron-oxo state termed "Compound I". This intermediate initiates a radical reaction in the oxygenase pathway but also can uptake two additional reducing equivalents from reduced pyridine nucleotide (NADPH) and the flavoprotein reductase to produce a second molecule of water. This non-productive decay of Compound I thus yields an overall oxygen to NADPH ratio of 1:2 and does not produce hydrocarbon oxidation. This water uncoupling reaction provides one of a limited means to study the reactivity of the critical Compound I intermediate in P450 catalysis. We measured simultaneously the rates of NADPH and oxygen consumption as a function of substrate concentration during the steady-state hydroxylation of testosterone catalyzed by human P450 CYP3A4 reconstituted in Nanodiscs. We discovered that the "oxidase" uncoupling pathway is also operating in the substrate free form of the enzyme with rate of this pathway substantially increasing with the first substrate binding event. Surprisingly, a large fraction of the reducing equivalents used by the P450 system is wasted in this oxidase pathway. In addition, the overall coupling with testosterone and bromocryptine as substrates is significantly higher in the presence of anionic lipids, which is attributed to the changes in the redox potential of CYP3A4 and reductase.
Copyright © 2012 Elsevier Inc. All rights reserved.

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Year:  2012        PMID: 23266608      PMCID: PMC4191626          DOI: 10.1016/j.bbrc.2012.12.072

Source DB:  PubMed          Journal:  Biochem Biophys Res Commun        ISSN: 0006-291X            Impact factor:   3.575


  30 in total

1.  Cytochrome P450 compound I: capture, characterization, and C-H bond activation kinetics.

Authors:  Jonathan Rittle; Michael T Green
Journal:  Science       Date:  2010-11-12       Impact factor: 47.728

2.  The role of NADH in uncoupled microsomal monoxygenations.

Authors:  H Staudt; F Lichtenberger; V Ullrich
Journal:  Eur J Biochem       Date:  1974-07-01

3.  Testosterone 1 beta-hydroxylation by human cytochrome P450 3A4.

Authors:  Joel A Krauser; Markus Voehler; Li-Hong Tseng; Alexandre B Schefer; Markus Godejohann; F Peter Guengerich
Journal:  Eur J Biochem       Date:  2004-10

4.  Deuterium isotope effects in norcamphor metabolism by cytochrome P-450cam: kinetic evidence for the two-electron reduction of a high-valent iron-oxo intermediate.

Authors:  W M Atkins; S G Sligar
Journal:  Biochemistry       Date:  1988-03-08       Impact factor: 3.162

5.  Role of Glu318 and Thr319 in the catalytic function of cytochrome P450d (P4501A2): effects of mutations on the methanol hydroxylation.

Authors:  K Hiroya; M Ishigooka; T Shimizu; M Hatano
Journal:  FASEB J       Date:  1992-01-06       Impact factor: 5.191

Review 6.  High-valent iron in chemical and biological oxidations.

Authors:  John T Groves
Journal:  J Inorg Biochem       Date:  2006-03-03       Impact factor: 4.155

7.  Properties of the oxygenated form of liver microsomal cytochrome P-450.

Authors:  D D Oprian; L D Gorsky; M J Coon
Journal:  J Biol Chem       Date:  1983-07-25       Impact factor: 5.157

8.  Homotropic cooperativity of monomeric cytochrome P450 3A4 in a nanoscale native bilayer environment.

Authors:  Bradley J Baas; Ilia G Denisov; Stephen G Sligar
Journal:  Arch Biochem Biophys       Date:  2004-10-15       Impact factor: 4.013

9.  Oxygen activation by cytochrome p450: a thermodynamic analysis.

Authors:  Willem H Koppenol
Journal:  J Am Chem Soc       Date:  2007-07-13       Impact factor: 15.419

10.  [Stoichiometry of microsomal oxidation reactions. Distribution of redox-equivalents in monooxygenase and oxidase reactions catalyzed by cytochrome P-450].

Authors:  A A Zhukov; A I Archakov
Journal:  Biokhimiia       Date:  1985-12
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  33 in total

1.  Functional importance of a peripheral pocket in mammalian cytochrome P450 2B enzymes.

Authors:  Hyun-Hee Jang; Jingbao Liu; Ga-Young Lee; James R Halpert; P Ross Wilderman
Journal:  Arch Biochem Biophys       Date:  2015-08-28       Impact factor: 4.013

2.  Could tyrosine and tryptophan serve multiple roles in biological redox processes?

Authors:  Jay R Winkler; Harry B Gray
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2015-03-13       Impact factor: 4.226

3.  Steroid bioconjugation to a CYP3A4 allosteric site and its effect on substrate binding and coupling efficiency.

Authors:  Vanja Polic; Irina F Sevrioukova; Karine Auclair
Journal:  Arch Biochem Biophys       Date:  2018-06-26       Impact factor: 4.013

Review 4.  Oxidative stress, unfolded protein response, and apoptosis in developmental toxicity.

Authors:  Allison Kupsco; Daniel Schlenk
Journal:  Int Rev Cell Mol Biol       Date:  2015-03-11       Impact factor: 6.813

Review 5.  Spectroscopic studies of the cytochrome P450 reaction mechanisms.

Authors:  Piotr J Mak; Ilia G Denisov
Journal:  Biochim Biophys Acta Proteins Proteom       Date:  2017-06-28       Impact factor: 3.036

Review 6.  Nanodiscs in Membrane Biochemistry and Biophysics.

Authors:  Ilia G Denisov; Stephen G Sligar
Journal:  Chem Rev       Date:  2017-02-08       Impact factor: 60.622

7.  Pivotal role of P450-P450 interactions in CYP3A4 allostery: the case of α-naphthoflavone.

Authors:  Dmitri R Davydov; Nadezhda Y Davydova; Elena V Sineva; Irina Kufareva; James R Halpert
Journal:  Biochem J       Date:  2013-07-15       Impact factor: 3.857

8.  Membrane environment drives cytochrome P450's spin transition and its interaction with cytochrome b5.

Authors:  Thirupathi Ravula; Carlo Barnaba; Mukesh Mahajan; G M Anantharamaiah; Sang-Choul Im; Lucy Waskell; Ayyalusamy Ramamoorthy
Journal:  Chem Commun (Camb)       Date:  2017-11-28       Impact factor: 6.222

Review 9.  Divergent mechanisms of iron-containing enzymes for hydrocarbon biosynthesis.

Authors:  Courtney E Wise; Job L Grant; Jose A Amaya; Steven C Ratigan; Chun H Hsieh; Olivia M Manley; Thomas M Makris
Journal:  J Biol Inorg Chem       Date:  2016-12-21       Impact factor: 3.358

10.  Iron(IV)hydroxide pK(a) and the role of thiolate ligation in C-H bond activation by cytochrome P450.

Authors:  Timothy H Yosca; Jonathan Rittle; Courtney M Krest; Elizabeth L Onderko; Alexey Silakov; Julio C Calixto; Rachel K Behan; Michael T Green
Journal:  Science       Date:  2013-11-15       Impact factor: 47.728

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