Literature DB >> 23266223

Segmentation of pituitary adenoma: a graph-based method vs. a balloon inflation method.

Jan Egger1, Dženan Zukić, Bernd Freisleben, Andreas Kolb, Christopher Nimsky.   

Abstract

Among all abnormal growths inside the skull, the percentage of tumors in sellar region is approximately 10-15%, and the pituitary adenoma is the most common sellar lesion. A time-consuming process that can be shortened by using adequate algorithms is the manual segmentation of pituitary adenomas. In this contribution, two methods for pituitary adenoma segmentation in the human brain are presented and compared using magnetic resonance imaging (MRI) patient data from the clinical routine: Method A is a graph-based method that sets up a directed and weighted graph and performs a min-cut for optimal segmentation results: Method B is a balloon inflation method that uses balloon inflation forces to detect the pituitary adenoma boundaries. The ground truth of the pituitary adenoma boundaries - for the evaluation of the methods - are manually extracted by neurosurgeons. Comparison is done using the Dice Similarity Coefficient (DSC), a measure for spatial overlap of different segmentation results. The average DSC for all data sets is 77.5±4.5% for the graph-based method and 75.9±7.2% for the balloon inflation method showing no significant difference. The overall segmentation time of the implemented approaches was less than 4s - compared with a manual segmentation that took, on the average, 3.9±0.5min.
Copyright © 2012 Elsevier Ireland Ltd. All rights reserved.

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Year:  2012        PMID: 23266223     DOI: 10.1016/j.cmpb.2012.11.010

Source DB:  PubMed          Journal:  Comput Methods Programs Biomed        ISSN: 0169-2607            Impact factor:   5.428


  4 in total

1.  Fully automatic and nonparametric quantification of adipose tissue in fat-water separation MR imaging.

Authors:  Defeng Wang; Lin Shi; Winnie C W Chu; Miao Hu; Brian Tomlinson; Wen-Hua Huang; Tianfu Wang; Pheng Ann Heng; David K W Yeung; Anil T Ahuja
Journal:  Med Biol Eng Comput       Date:  2015-08-06       Impact factor: 2.602

2.  Research on multi-path dense networks for MRI spinal segmentation.

Authors:  ShuFen Liang; Huilin Liu; Chen Chen; Chuanbo Qin; FangChen Yang; Yue Feng; Zhuosheng Lin
Journal:  PLoS One       Date:  2021-03-12       Impact factor: 3.240

3.  Algorithm guided outlining of 105 pancreatic cancer liver metastases in Ultrasound.

Authors:  Alexander Hann; Lucas Bettac; Mark M Haenle; Tilmann Graeter; Andreas W Berger; Jens Dreyhaupt; Dieter Schmalstieg; Wolfram G Zoller; Jan Egger
Journal:  Sci Rep       Date:  2017-10-06       Impact factor: 4.379

4.  Three-Dimensional Semantic Segmentation of Pituitary Adenomas Based on the Deep Learning Framework-nnU-Net: A Clinical Perspective.

Authors:  Xujun Shu; Yijie Zhou; Fangye Li; Tao Zhou; Xianghui Meng; Fuyu Wang; Zhizhong Zhang; Jian Pu; Bainan Xu
Journal:  Micromachines (Basel)       Date:  2021-11-29       Impact factor: 2.891

  4 in total

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