Literature DB >> 23264749

Electron Transfer Dissociation: Effects of Cation Charge State on Product Partitioning in Ion/Ion Electron Transfer to Multiply Protonated Polypeptides.

Jian Liu1, Scott A McLuckey.   

Abstract

The effect of cation charge state on product partitioning in the gas-phase ion/ion electron transfer reactions of multiply protonated tryptic peptides, model peptides, and relatively large peptides with singly charged radical anions has been examined. In particular, partitioning into various competing channels, such as proton transfer (PT) versus electron transfer (ET), electron transfer with subsequent dissociation (ETD) versus electron transfer with no dissociation (ET,noD), and fragmentation of backbone bonds versus fragmentation of side chains, was measured quantitatively as a function of peptide charge state to allow insights to be drawn about the fundamental aspects of ion/ion reactions that lead to ETD. The ET channel increases relative to the PT channel, ETD increases relative to ET,noD, and fragmentation at backbone bonds increases relative to side-chain cleavages as cation charge state increases. The increase in ET versus PT with charge state is consistent with a Landau-Zener based curve-crossing model. An optimum charge state for ET is predicted by the model for the ground state-to-ground state reaction. However, when the population of excited product ion states is considered, it is possible that a decrease in ET efficiency as charge state increases will not be observed due to the possibility of the population of excited electronic states of the products. Several factors can contribute to the increase in ETD versus ET,noD and backbone cleavage versus side-chain losses. These factors include an increase in reaction exothermicity and charge state dependent differences in precursor and product ion structures, stabilities, and sites of protonation.

Entities:  

Year:  2012        PMID: 23264749      PMCID: PMC3525064          DOI: 10.1016/j.ijms.2012.07.013

Source DB:  PubMed          Journal:  Int J Mass Spectrom        ISSN: 1387-3806            Impact factor:   1.986


  46 in total

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Authors:  Julia Laskin; Jean H Futrell
Journal:  Mass Spectrom Rev       Date:  2005 Mar-Apr       Impact factor: 10.946

2.  Estimation of the coupling matrix elements for one-electron transfer systems.

Authors:  R E Olson; F T Smith; E Bauer
Journal:  Appl Opt       Date:  1971-08-01       Impact factor: 1.980

3.  Dissociation of peptide ions by fast atom bombardment in a quadrupole ion trap.

Authors:  Alexander S Misharin; Oleg A Silivra; Frank Kjeldsen; Roman A Zubarev
Journal:  Rapid Commun Mass Spectrom       Date:  2005       Impact factor: 2.419

4.  Supplemental activation method for high-efficiency electron-transfer dissociation of doubly protonated peptide precursors.

Authors:  Danielle L Swaney; Graeme C McAlister; Matthew Wirtala; Jae C Schwartz; John E P Syka; Joshua J Coon
Journal:  Anal Chem       Date:  2007-01-15       Impact factor: 6.986

5.  Optimization of electron transfer dissociation via informed selection of reagents and operating parameters.

Authors:  Philip D Compton; Joseph V Strukl; Dina L Bai; Jeffrey Shabanowitz; Donald F Hunt
Journal:  Anal Chem       Date:  2012-01-06       Impact factor: 6.986

6.  Activated-ion electron transfer dissociation improves the ability of electron transfer dissociation to identify peptides in a complex mixture.

Authors:  Aaron R Ledvina; Nicole A Beauchene; Graeme C McAlister; John E P Syka; Jae C Schwartz; Jens Griep-Raming; Michael S Westphall; Joshua J Coon
Journal:  Anal Chem       Date:  2010-11-09       Impact factor: 6.986

7.  Ionization energies of multiply protonated polypeptides obtained by tandem ionization in Fourier transform mass spectrometers.

Authors:  Bogdan A Budnik; Youri O Tsybin; Per Håkansson; Roman A Zubarev
Journal:  J Mass Spectrom       Date:  2002-11       Impact factor: 1.982

8.  Collisions or electrons? Protein sequence analysis in the 21st century.

Authors:  Joshua J Coon
Journal:  Anal Chem       Date:  2009-05-01       Impact factor: 6.986

9.  Electron transfer dissociation of amide nitrogen methylated polypeptide cations.

Authors:  David M Crizer; Scott A McLuckey
Journal:  J Am Soc Mass Spectrom       Date:  2009-04-05       Impact factor: 3.109

10.  Metastable atom-activated dissociation mass spectrometry: leucine/isoleucine differentiation and ring cleavage of proline residues.

Authors:  Shannon L Cook; Olivier L Collin; Glen P Jackson
Journal:  J Mass Spectrom       Date:  2009-08       Impact factor: 1.982

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  23 in total

1.  Real-time HD Exchange Kinetics of Proteins from Buffered Aqueous Solution with Electrothermal Supercharging and Top-Down Tandem Mass Spectrometry.

Authors:  Catherine C Going; Zijie Xia; Evan R Williams
Journal:  J Am Soc Mass Spectrom       Date:  2016-02-26       Impact factor: 3.109

2.  Extensive Charge Reduction and Dissociation of Intact Protein Complexes Following Electron Transfer on a Quadrupole-Ion Mobility-Time-of-Flight MS.

Authors:  Frederik Lermyte; Jonathan P Williams; Jeffery M Brown; Esther M Martin; Frank Sobott
Journal:  J Am Soc Mass Spectrom       Date:  2015-04-11       Impact factor: 3.109

3.  Charge Transfer Dissociation (CTD) Mass Spectrometry of Peptide Cations: Study of Charge State Effects and Side-Chain Losses.

Authors:  Pengfei Li; Glen P Jackson
Journal:  J Am Soc Mass Spectrom       Date:  2017-01-13       Impact factor: 3.109

4.  ETD allows for native surface mapping of a 150 kDa noncovalent complex on a commercial Q-TWIMS-TOF instrument.

Authors:  Frederik Lermyte; Albert Konijnenberg; Jonathan P Williams; Jeffery M Brown; Dirk Valkenborg; Frank Sobott
Journal:  J Am Soc Mass Spectrom       Date:  2014-01-10       Impact factor: 3.109

5.  Recent Developments in Gas-Phase Ion/Ion Reactions for Analytical Mass Spectrometry.

Authors:  David J Foreman; Scott A McLuckey
Journal:  Anal Chem       Date:  2019-11-26       Impact factor: 6.986

6.  Charge transfer dissociation (CTD) mass spectrometry of peptide cations using kiloelectronvolt helium cations.

Authors:  William D Hoffmann; Glen P Jackson
Journal:  J Am Soc Mass Spectrom       Date:  2014-09-18       Impact factor: 3.109

7.  Negative Electron Transfer Dissociation Sequencing of Increasingly Sulfated Glycosaminoglycan Oligosaccharides on an Orbitrap Mass Spectrometer.

Authors:  Franklin E Leach; Nicholas M Riley; Michael S Westphall; Joshua J Coon; I Jonathan Amster
Journal:  J Am Soc Mass Spectrom       Date:  2017-06-06       Impact factor: 3.109

8.  Glycan size and attachment site location affect electron transfer dissociation (ETD) fragmentation and automated glycopeptide identification.

Authors:  Kathirvel Alagesan; Hannes Hinneburg; Peter H Seeberger; Daniel Varón Silva; Daniel Kolarich
Journal:  Glycoconj J       Date:  2019-10-21       Impact factor: 2.916

9.  Leveraging Electron Transfer Dissociation for Site Selective Radical Generation: Applications for Peptide Epimer Analysis.

Authors:  Yana A Lyon; Gregory Beran; Ryan R Julian
Journal:  J Am Soc Mass Spectrom       Date:  2017-04-03       Impact factor: 3.109

10.  Ribonucleic Acid Sequence Characterization by Negative Electron Transfer Dissociation Mass Spectrometry.

Authors:  Trenton M Peters-Clarke; Qiuwen Quan; Dain R Brademan; Alexander S Hebert; Michael S Westphall; Joshua J Coon
Journal:  Anal Chem       Date:  2020-03-05       Impact factor: 6.986

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