Literature DB >> 2326253

A mutant T4 lysozyme (Val 131----Ala) designed to increase thermostability by the reduction of strain within an alpha-helix.

S Dao-Pin1, W A Baase, B W Matthews.   

Abstract

An attempt has been made to identify residues in T4 phage lysozyme that may have strained conformations and, by appropriate site-directed replacements, to reduce this strain and thus increase the thermostability of the protein. Valine 131, within alpha-helix 126-134, was identified as a potential candidate. Its side-chain rotational angle, chi 1, differs by approximately 18 degrees from the low-energy trans configuration. In addition, it is largely solvent exposed, yet is held in a rigid conformation. The mutant protein with Val 131 replaced by alanine was constructed and found to have a melting temperature 0.9 degrees C higher than that of wild-type lysozyme at pH 2.8. As a control, the mutant Val 131----Thr was also constructed and its melting temperature was found to be marginally lower than wild type. High-resolution crystal structure determinations of the mutant lysozymes show that their structures are virtually identical with that of wild-type lysozyme, except for the Val----Ala or Val----Thr replacement. Analysis of the different structures suggests that the design of the Val----Ala substitution was, in principle, successful, although the apparent gain in stability caused by reduction in strain is modest and is somewhat offset by the loss of hydrophobic interactions and by entropic effects. The results also help to provide a structural rationalization for the experimental and empirical observations that alanine has a higher helix propensity than valine or threonine.

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Year:  1990        PMID: 2326253     DOI: 10.1002/prot.340070208

Source DB:  PubMed          Journal:  Proteins        ISSN: 0887-3585


  13 in total

1.  Similarity between fluorescein-specific T-cell receptor and antibody in chemical details of antigen recognition.

Authors:  R K Ganju; S T Smiley; J Bajorath; J Novotny; E L Reinherz
Journal:  Proc Natl Acad Sci U S A       Date:  1992-12-01       Impact factor: 11.205

2.  Folding and function of a T4 lysozyme containing 10 consecutive alanines illustrate the redundancy of information in an amino acid sequence.

Authors:  D W Heinz; W A Baase; B W Matthews
Journal:  Proc Natl Acad Sci U S A       Date:  1992-05-01       Impact factor: 11.205

Review 3.  Prediction and analysis of structure, stability and unfolding of thermolysin-like proteases.

Authors:  G Vriend; V Eijsink
Journal:  J Comput Aided Mol Des       Date:  1993-08       Impact factor: 3.686

4.  Hydrophobic core repacking and aromatic-aromatic interaction in the thermostable mutant of T4 lysozyme Ser 117-->Phe.

Authors:  D E Anderson; J H Hurley; H Nicholson; W A Baase; B W Matthews
Journal:  Protein Sci       Date:  1993-08       Impact factor: 6.725

5.  Double-stranded DNA templates can induce alpha-helical conformation in peptides containing lysine and alanine: functional implications for leucine zipper and helix-loop-helix transcription factors.

Authors:  N P Johnson; J Lindstrom; W A Baase; P H von Hippel
Journal:  Proc Natl Acad Sci U S A       Date:  1994-05-24       Impact factor: 11.205

6.  A relationship between protein stability and protein function.

Authors:  B K Shoichet; W A Baase; R Kuroki; B W Matthews
Journal:  Proc Natl Acad Sci U S A       Date:  1995-01-17       Impact factor: 11.205

7.  What determines the strength of noncovalent association of ligands to proteins in aqueous solution?

Authors:  S Miyamoto; P A Kollman
Journal:  Proc Natl Acad Sci U S A       Date:  1993-09-15       Impact factor: 11.205

8.  Engineering multiple properties of a protein by combinatorial mutagenesis.

Authors:  W S Sandberg; T C Terwilliger
Journal:  Proc Natl Acad Sci U S A       Date:  1993-09-15       Impact factor: 11.205

9.  Structural basis for thermostability revealed through the identification and characterization of a highly thermostable phosphotriesterase-like lactonase from Geobacillus stearothermophilus.

Authors:  Renda Hawwa; John Aikens; Robert J Turner; Bernard D Santarsiero; Andrew D Mesecar
Journal:  Arch Biochem Biophys       Date:  2009-07-16       Impact factor: 4.013

10.  Characterization of nucleocapsid binding by the measles virus and mumps virus phosphoproteins.

Authors:  Richard L Kingston; Walter A Baase; Leslie S Gay
Journal:  J Virol       Date:  2004-08       Impact factor: 5.103

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