Literature DB >> 19615330

Structural basis for thermostability revealed through the identification and characterization of a highly thermostable phosphotriesterase-like lactonase from Geobacillus stearothermophilus.

Renda Hawwa1, John Aikens, Robert J Turner, Bernard D Santarsiero, Andrew D Mesecar.   

Abstract

A new enzyme homologous to phosphotriesterase was identified from the bacterium Geobacillus stearothermophilus (GsP). This enzyme belongs to the amidohydrolase family and possesses the ability to hydrolyze both lactone and organophosphate (OP) compounds, making it a phosphotriesterase-like lactonase (PLL). GsP possesses higher OP-degrading activity than recently characterized PLLs, and it is extremely thermostable. GsP is active up to 100 degrees C with an energy of activation of 8.0 kcal/mol towards ethyl paraoxon, and it can withstand an incubation temperature of 60 degrees C for two days. In an attempt to understand the thermostability of PLLs, the X-ray structure of GsP was determined and compared to those of existing PLLs. Based upon a comparative analysis, a new thermal advantage score and plot was developed and reveals that a number of different factors contribute to the thermostability of PLLs.

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Year:  2009        PMID: 19615330      PMCID: PMC5433624          DOI: 10.1016/j.abb.2009.06.005

Source DB:  PubMed          Journal:  Arch Biochem Biophys        ISSN: 0003-9861            Impact factor:   4.013


  57 in total

1.  Transproteomic evidence of a loop-deletion mechanism for enhancing protein thermostability.

Authors:  M J Thompson; D Eisenberg
Journal:  J Mol Biol       Date:  1999-07-09       Impact factor: 5.469

Review 2.  Hyperthermophilic enzymes: sources, uses, and molecular mechanisms for thermostability.

Authors:  C Vieille; G J Zeikus
Journal:  Microbiol Mol Biol Rev       Date:  2001-03       Impact factor: 11.056

3.  Thermal adaptation analyzed by comparison of protein sequences from mesophilic and extremely thermophilic Methanococcus species.

Authors:  P J Haney; J H Badger; G L Buldak; C I Reich; C R Woese; G J Olsen
Journal:  Proc Natl Acad Sci U S A       Date:  1999-03-30       Impact factor: 11.205

4.  VEGA--an open platform to develop chemo-bio-informatics applications, using plug-in architecture and script programming.

Authors:  Alessandro Pedretti; Luigi Villa; Giulio Vistoli
Journal:  J Comput Aided Mol Des       Date:  2004-03       Impact factor: 3.686

5.  Increasing the thermostability of a neutral protease by replacing positively charged amino acids in the N-terminal turn of alpha-helices.

Authors:  V G Eijsink; G Vriend; B van den Burg; J R van der Zee; G Venema
Journal:  Protein Eng       Date:  1992-03

6.  An evolutionary treasure: unification of a broad set of amidohydrolases related to urease.

Authors:  L Holm; C Sander
Journal:  Proteins       Date:  1997-05

7.  The wild type bacterial Co(2+)/Co(2+)-phosphotriesterase shows a middle-range thermostability.

Authors:  Daniel Rochu; Nadège Beaufet; Frédérique Renault; Nathalie Viguié; Patrick Masson
Journal:  Biochim Biophys Acta       Date:  2002-02-11

8.  Engineering protein thermal stability. Sequence statistics point to residue substitutions in alpha-helices.

Authors:  L Menéndez-Arias; P Argos
Journal:  J Mol Biol       Date:  1989-03-20       Impact factor: 5.469

9.  Molecular determinants of xylose isomerase thermal stability and activity: analysis of thermozymes by site-directed mutagenesis.

Authors:  D Sriprapundh; C Vieille; J G Zeikus
Journal:  Protein Eng       Date:  2000-04

10.  Structural basis for natural lactonase and promiscuous phosphotriesterase activities.

Authors:  Mikael Elias; Jérôme Dupuy; Luigia Merone; Luigi Mandrich; Elena Porzio; Sébastien Moniot; Daniel Rochu; Claude Lecomte; Mosè Rossi; Patrick Masson; Giuseppe Manco; Eric Chabriere
Journal:  J Mol Biol       Date:  2008-04-16       Impact factor: 5.469

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  24 in total

1.  Function discovery and structural characterization of a methylphosphonate esterase.

Authors:  Dao Feng Xiang; Yury Patskovsky; Venkatesh V Nemmara; Rafael Toro; Steven C Almo; Frank M Raushel
Journal:  Biochemistry       Date:  2015-04-28       Impact factor: 3.162

2.  Structure-based function discovery of an enzyme for the hydrolysis of phosphorylated sugar lactones.

Authors:  Dao Feng Xiang; Peter Kolb; Alexander A Fedorov; Chengfu Xu; Elena V Fedorov; Tamari Narindoshivili; Howard J Williams; Brian K Shoichet; Steven C Almo; Frank M Raushel
Journal:  Biochemistry       Date:  2012-02-15       Impact factor: 3.162

3.  Crystal structure of the nonerythroid alpha-spectrin tetramerization site reveals differences between erythroid and nonerythroid spectrin tetramer formation.

Authors:  Shahila Mehboob; Yuanli Song; Marta Witek; Fei Long; Bernard D Santarsiero; Michael E Johnson; Leslie W-M Fung
Journal:  J Biol Chem       Date:  2010-03-14       Impact factor: 5.157

4.  Directed evolution of a thermostable quorum-quenching lactonase from the amidohydrolase superfamily.

Authors:  Jeng Yeong Chow; Bo Xue; Kang Hao Lee; Alvin Tung; Long Wu; Robert C Robinson; Wen Shan Yew
Journal:  J Biol Chem       Date:  2010-10-27       Impact factor: 5.157

5.  Crystallization and preliminary X-ray diffraction analysis of the hyperthermophilic Sulfolobus islandicus lactonase.

Authors:  Guillaume Gotthard; Julien Hiblot; Mikael Elias; Eric Chabrière
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2011-02-25

6.  Crystallization and preliminary X-ray diffraction analysis of the lactonase VmoLac from Vulcanisaeta moutnovskia.

Authors:  Julien Hiblot; Guillaume Gotthard; Charlotte Champion; Eric Chabriere; Mikael Elias
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2013-10-17

7.  Structural evidence of a productive active site architecture for an evolved quorum-quenching GKL lactonase.

Authors:  Bo Xue; Jeng Yeong Chow; Amgalanbaatar Baldansuren; Lai Lai Yap; Yunn Hwen Gan; Sergei A Dikanov; Robert C Robinson; Wen Shan Yew
Journal:  Biochemistry       Date:  2013-03-19       Impact factor: 3.162

8.  Enhancing the promiscuous phosphotriesterase activity of a thermostable lactonase (GkaP) for the efficient degradation of organophosphate pesticides.

Authors:  Yu Zhang; Jiao An; Wei Ye; Guangyu Yang; Zhi-Gang Qian; Hai-Feng Chen; Li Cui; Yan Feng
Journal:  Appl Environ Microbiol       Date:  2012-07-13       Impact factor: 4.792

9.  Disruption of biofilm formation by the human pathogen Acinetobacter baumannii using engineered quorum-quenching lactonases.

Authors:  Jeng Yeong Chow; Yuanyong Yang; Song Buck Tay; Kim Lee Chua; Wen Shan Yew
Journal:  Antimicrob Agents Chemother       Date:  2013-12-30       Impact factor: 5.191

10.  Characterisation of the organophosphate hydrolase catalytic activity of SsoPox.

Authors:  Julien Hiblot; Guillaume Gotthard; Eric Chabriere; Mikael Elias
Journal:  Sci Rep       Date:  2012-11-08       Impact factor: 4.379

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