Literature DB >> 23257981

Adapting human pluripotent stem cells to high-throughput and high-content screening.

Sabrina C Desbordes1, Lorenz Studer.   

Abstract

The increasing use of human pluripotent stem cells (hPSCs) as a source of cells for drug discovery, cytotoxicity assessment and disease modeling requires their adaptation to large-scale culture conditions and screening formats. Here, we describe a simple and robust protocol for the adaptation of human embryonic stem cells (hESCs) to high-throughput screening (HTS). This protocol can also be adapted to human induced pluripotent stem cells (hiPSCs) and high-content screening (HCS). We also describe a 7-d assay to identify compounds with an effect on hESC self-renewal and differentiation. This assay can be adapted to a variety of applications. The procedure involves the culture expansion of hESCs, their adaptation to 384-well plates, the addition of small molecules or other factors, and finally data acquisition and processing. In this protocol, the optimal number of hESCs plated in 384-well plates has been adapted to HTS/HCS assays of 7 d.

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Year:  2012        PMID: 23257981     DOI: 10.1038/nprot.2012.139

Source DB:  PubMed          Journal:  Nat Protoc        ISSN: 1750-2799            Impact factor:   13.491


  79 in total

1.  Core transcriptional regulatory circuitry in human embryonic stem cells.

Authors:  Laurie A Boyer; Tong Ihn Lee; Megan F Cole; Sarah E Johnstone; Stuart S Levine; Jacob P Zucker; Matthew G Guenther; Roshan M Kumar; Heather L Murray; Richard G Jenner; David K Gifford; Douglas A Melton; Rudolf Jaenisch; Richard A Young
Journal:  Cell       Date:  2005-09-23       Impact factor: 41.582

2.  Design and implementation of high-throughput RNAi screens in cultured Drosophila cells.

Authors:  Nadire Ramadan; Ian Flockhart; Matthew Booker; Norbert Perrimon; Bernard Mathey-Prevot
Journal:  Nat Protoc       Date:  2007       Impact factor: 13.491

3.  A small molecule primes embryonic stem cells for differentiation.

Authors:  Shoutian Zhu; Heiko Wurdak; Jian Wang; Costas A Lyssiotis; Eric C Peters; Charles Y Cho; Xu Wu; Peter G Schultz
Journal:  Cell Stem Cell       Date:  2009-05-08       Impact factor: 24.633

4.  High-throughput screening assay for the identification of compounds regulating self-renewal and differentiation in human embryonic stem cells.

Authors:  Sabrina C Desbordes; Dimitris G Placantonakis; Anthony Ciro; Nicholas D Socci; Gabsang Lee; Hakim Djaballah; Lorenz Studer
Journal:  Cell Stem Cell       Date:  2008-06-05       Impact factor: 24.633

5.  A small molecule that directs differentiation of human ESCs into the pancreatic lineage.

Authors:  Shuibing Chen; Malgorzata Borowiak; Julia L Fox; René Maehr; Kenji Osafune; Lance Davidow; Kelvin Lam; Lee F Peng; Stuart L Schreiber; Lee L Rubin; Douglas Melton
Journal:  Nat Chem Biol       Date:  2009-03-15       Impact factor: 15.040

6.  A genome-wide RNAi screen reveals determinants of human embryonic stem cell identity.

Authors:  Na-Yu Chia; Yun-Shen Chan; Bo Feng; Xinyi Lu; Yuriy L Orlov; Dimitri Moreau; Pankaj Kumar; Lin Yang; Jianming Jiang; Mei-Sheng Lau; Mikael Huss; Boon-Seng Soh; Petra Kraus; Pin Li; Thomas Lufkin; Bing Lim; Neil D Clarke; Frederic Bard; Huck-Hui Ng
Journal:  Nature       Date:  2010-10-17       Impact factor: 49.962

7.  Dynamic suspension culture for scalable expansion of undifferentiated human pluripotent stem cells.

Authors:  Michal Amit; Ilana Laevsky; Yael Miropolsky; Kohava Shariki; Meital Peri; Joseph Itskovitz-Eldor
Journal:  Nat Protoc       Date:  2011-04-07       Impact factor: 13.491

8.  Reprogramming of human somatic cells to pluripotency with defined factors.

Authors:  In-Hyun Park; Rui Zhao; Jason A West; Akiko Yabuuchi; Hongguang Huo; Tan A Ince; Paul H Lerou; M William Lensch; George Q Daley
Journal:  Nature       Date:  2007-12-23       Impact factor: 49.962

9.  Telomere shortening and loss of self-renewal in dyskeratosis congenita induced pluripotent stem cells.

Authors:  Luis F Z Batista; Matthew F Pech; Franklin L Zhong; Ha Nam Nguyen; Kathleen T Xie; Arthur J Zaug; Sharon M Crary; Jinkuk Choi; Vittorio Sebastiano; Athena Cherry; Neelam Giri; Marius Wernig; Blanche P Alter; Thomas R Cech; Sharon A Savage; Renee A Reijo Pera; Steven E Artandi
Journal:  Nature       Date:  2011-05-22       Impact factor: 49.962

10.  Modelling pathogenesis and treatment of familial dysautonomia using patient-specific iPSCs.

Authors:  Gabsang Lee; Eirini P Papapetrou; Hyesoo Kim; Stuart M Chambers; Mark J Tomishima; Christopher A Fasano; Yosif M Ganat; Jayanthi Menon; Fumiko Shimizu; Agnes Viale; Viviane Tabar; Michel Sadelain; Lorenz Studer
Journal:  Nature       Date:  2009-08-19       Impact factor: 49.962

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  28 in total

Review 1.  Clinical Trials in a Dish: The Potential of Pluripotent Stem Cells to Develop Therapies for Neurodegenerative Diseases.

Authors:  Kelly M Haston; Steven Finkbeiner
Journal:  Annu Rev Pharmacol Toxicol       Date:  2015-10-28       Impact factor: 13.820

2.  A Universal and Robust Integrated Platform for the Scalable Production of Human Cardiomyocytes From Pluripotent Stem Cells.

Authors:  Hananeh Fonoudi; Hassan Ansari; Saeed Abbasalizadeh; Mehran Rezaei Larijani; Sahar Kiani; Shiva Hashemizadeh; Ali Sharifi Zarchi; Alexis Bosman; Gillian M Blue; Sara Pahlavan; Matthew Perry; Yishay Orr; Yaroslav Mayorchak; Jamie Vandenberg; Mahmood Talkhabi; David S Winlaw; Richard P Harvey; Nasser Aghdami; Hossein Baharvand
Journal:  Stem Cells Transl Med       Date:  2015-10-28       Impact factor: 6.940

Review 3.  HTS/HCS to screen molecules able to maintain embryonic stem cell self-renewal or to induce differentiation: overview of protocols.

Authors:  Genesia Manganelli; Ugo Masullo; Stefania Filosa
Journal:  Stem Cell Rev Rep       Date:  2014-12       Impact factor: 5.739

4.  In vivo high-content evaluation of three-dimensional scaffolds biocompatibility.

Authors:  Mariana B Oliveira; Maximiano P Ribeiro; Sónia P Miguel; Ana I Neto; Paula Coutinho; Ilídio J Correia; João F Mano
Journal:  Tissue Eng Part C Methods       Date:  2014-03-31       Impact factor: 3.056

5.  Generation of human muscle fibers and satellite-like cells from human pluripotent stem cells in vitro.

Authors:  Jérome Chal; Ziad Al Tanoury; Marie Hestin; Bénédicte Gobert; Suvi Aivio; Aurore Hick; Thomas Cherrier; Alexander P Nesmith; Kevin K Parker; Olivier Pourquié
Journal:  Nat Protoc       Date:  2016-09-01       Impact factor: 13.491

Review 6.  Functional and Biomimetic Materials for Engineering of the Three-Dimensional Cell Microenvironment.

Authors:  Guoyou Huang; Fei Li; Xin Zhao; Yufei Ma; Yuhui Li; Min Lin; Guorui Jin; Tian Jian Lu; Guy M Genin; Feng Xu
Journal:  Chem Rev       Date:  2017-10-09       Impact factor: 60.622

7.  Human induced pluripotent stem cells derived endothelial cells mimicking vascular inflammatory response under flow.

Authors:  Li Wang; Meng Xiang; Yingying Liu; Ning Sun; Meng Lu; Yang Shi; Xinhong Wang; Dan Meng; Sifeng Chen; Jianhua Qin
Journal:  Biomicrofluidics       Date:  2016-01-13       Impact factor: 2.800

8.  Development of a high-throughput arrayed neural circuitry platform using human induced neurons for drug screening applications.

Authors:  Joseph A Fantuzzo; Denise A Robles; Vincent R Mirabella; Ronald P Hart; Zhiping P Pang; Jeffrey D Zahn
Journal:  Lab Chip       Date:  2020-03-17       Impact factor: 6.799

Review 9.  Small molecule screening in human induced pluripotent stem cell-derived terminal cell types.

Authors:  Sandra J Engle; Fabien Vincent
Journal:  J Biol Chem       Date:  2013-12-20       Impact factor: 5.157

Review 10.  Innovation in academic chemical screening: filling the gaps in chemical biology.

Authors:  Samuel A Hasson; James Inglese
Journal:  Curr Opin Chem Biol       Date:  2013-05-14       Impact factor: 8.822

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