Literature DB >> 23254132

Serotype analysis of Streptococcus pneumoniae in lung and nasopharyngeal aspirates from children in the Gambia by MassTag PCR.

Rafal Tokarz1, Thomas Briese, Gerard Morris, Readon Ideh, Osaretin Chimah, Bernard Ebruke, Aaloki Desai, Saddef Haq, Stephen Sameroff, Stephen R C Howie, W Ian Lipkin.   

Abstract

Streptococcus pneumoniae strains comprise >90 serotypes. Here we describe establishment of a MassTag PCR assay designed to serotype S. pneumoniae and demonstrate its utility in tests using 31 paired lung aspirate and nasopharyngeal aspirate samples from children with pneumonia in the Gambia. Serotypes 1, 5, and 14 in were implicated in 90% of lung infections. With 5 exceptions, serotypes found in lung aspirates were also found in nasopharyngeal aspirates.

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Year:  2012        PMID： 23254132      PMCID： PMC3592066          DOI： 10.1128/JCM.02974-12

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN： 0095-1137            Impact factor:   5.948


  16 in total

1.  Sequential multiplex PCR approach for determining capsular serotypes of Streptococcus pneumoniae isolates.

Authors:  Rekha Pai; Robert E Gertz; Bernard Beall
Journal:  J Clin Microbiol       Date:  2006-01       Impact factor: 5.948

2.  Detection of tick-borne pathogens by MassTag polymerase chain reaction.

Authors:  Rafal Tokarz; Vishal Kapoor; James E Samuel; Donald H Bouyer; Thomas Briese; W Ian Lipkin
Journal:  Vector Borne Zoonotic Dis       Date:  2009-04       Impact factor: 2.133

Review 3.  Transthoracic lung aspiration for the aetiological diagnosis of pneumonia: 25 years of experience from The Gambia.

Authors:  R C Ideh; S R C Howie; B Ebruke; O Secka; B M Greenwood; R A Adegbola; T Corrah
Journal:  Int J Tuberc Lung Dis       Date:  2011-04-07       Impact factor: 2.373

Review 4.  Streptococcus pneumoniae--a review of carriage, infection, serotype replacement and vaccination.

Authors:  Sam Mehr; Nicholas Wood
Journal:  Paediatr Respir Rev       Date:  2012-01-18       Impact factor: 2.726

Review 5.  Systematic evaluation of serotypes causing invasive pneumococcal disease among children under five: the pneumococcal global serotype project.

Authors:  Hope L Johnson; Maria Deloria-Knoll; Orin S Levine; Sonia K Stoszek; Laura Freimanis Hance; Richard Reithinger; Larry R Muenz; Katherine L O'Brien
Journal:  PLoS Med       Date:  2010-10-05       Impact factor: 11.069

6.  Sustained reductions in invasive pneumococcal disease in the era of conjugate vaccine.

Authors:  Tamara Pilishvili; Catherine Lexau; Monica M Farley; James Hadler; Lee H Harrison; Nancy M Bennett; Arthur Reingold; Ann Thomas; William Schaffner; Allen S Craig; Philip J Smith; Bernard W Beall; Cynthia G Whitney; Matthew R Moore
Journal:  J Infect Dis       Date:  2010-01-01       Impact factor: 5.226

7.  Evaluation and improvement of real-time PCR assays targeting lytA, ply, and psaA genes for detection of pneumococcal DNA.

Authors:  Maria da Gloria S Carvalho; Maria Lucia Tondella; Karen McCaustland; Luciana Weidlich; Lesley McGee; Leonard W Mayer; Arnold Steigerwalt; Melissa Whaley; Richard R Facklam; Barry Fields; George Carlone; Edwin W Ades; Ron Dagan; Jacquelyn S Sampson
Journal:  J Clin Microbiol       Date:  2007-05-30       Impact factor: 5.948

Review 8.  Burden of disease caused by Streptococcus pneumoniae in children younger than 5 years: global estimates.

Authors:  Katherine L O'Brien; Lara J Wolfson; James P Watt; Emily Henkle; Maria Deloria-Knoll; Natalie McCall; Ellen Lee; Kim Mulholland; Orin S Levine; Thomas Cherian
Journal:  Lancet       Date:  2009-09-12       Impact factor: 79.321

9.  MassTag polymerase chain reaction for differential diagnosis of viral hemorrhagic fever.

Authors:  Gustavo Palacios; Thomas Briese; Vishal Kapoor; Omar Jabado; Zhiqiang Liu; Marietjie Venter; Junhui Zhai; Neil Renwick; Allen Grolla; Thomas W Geisbert; Christian Drosten; Jonathan Towner; Jingyue Ju; Janusz Paweska; Stuart T Nichol; Robert Swanepoel; Heinz Feldmann; Peter B Jahrling; W Ian Lipkin
Journal:  Emerg Infect Dis       Date:  2006-04       Impact factor: 6.883

10.  Diagnostic system for rapid and sensitive differential detection of pathogens.

Authors:  Thomas Briese; Gustavo Palacios; Mark Kokoris; Omar Jabado; Zhiqiang Liu; Neil Renwick; Vishal Kapoor; Inmaculada Casas; Francisco Pozo; Ron Limberger; Pilar Perez-Brena; Jingyue Ju; W Ian Lipkin
Journal:  Emerg Infect Dis       Date:  2005-02       Impact factor: 6.883
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  5 in total

Review 1.  Pneumococcal Capsules and Their Types: Past, Present, and Future.

Authors:  K Aaron Geno; Gwendolyn L Gilbert; Joon Young Song; Ian C Skovsted; Keith P Klugman; Christopher Jones; Helle B Konradsen; Moon H Nahm
Journal:  Clin Microbiol Rev       Date:  2015-07       Impact factor: 26.132

2.  Single-plex quantitative assays for the detection and quantification of most pneumococcal serotypes.

Authors:  Fuminori Sakai; Sopio Chochua; Catherine Satzke; Eileen M Dunne; Kim Mulholland; Keith P Klugman; Jorge E Vidal
Journal:  PLoS One       Date:  2015-03-23       Impact factor: 3.240

3.  The PneuCarriage Project: A Multi-Centre Comparative Study to Identify the Best Serotyping Methods for Examining Pneumococcal Carriage in Vaccine Evaluation Studies.

Authors:  Catherine Satzke; Eileen M Dunne; Barbara D Porter; Keith P Klugman; E Kim Mulholland
Journal:  PLoS Med       Date:  2015-11-17       Impact factor: 11.069

4.  Etiology of severe childhood pneumonia in the Gambia, West Africa, determined by conventional and molecular microbiological analyses of lung and pleural aspirate samples.

Authors:  Stephen R C Howie; Gerard A J Morris; Rafal Tokarz; Bernard E Ebruke; Eunice M Machuka; Readon C Ideh; Osaretin Chimah; Ousman Secka; John Townend; Michel Dione; Claire Oluwalana; Malick Njie; Mariatou Jallow; Philip C Hill; Martin Antonio; Brian Greenwood; Thomas Briese; Kim Mulholland; Tumani Corrah; W Ian Lipkin; Richard A Adegbola
Journal:  Clin Infect Dis       Date:  2014-05-27       Impact factor: 9.079

5.  Insights Into Pneumococcal Pneumonia Using Lung Aspirates and Nasopharyngeal Swabs Collected From Pneumonia Patients in The Gambia.

Authors:  Eileen M Dunne; Yinglei Hua; Rasheed Salaudeen; Ilias Hossain; Malick Ndiaye; Belinda D Ortika; E Kim Mulholland; Jason Hinds; Sam Manna; Grant A Mackenzie; Catherine Satzke
Journal:  J Infect Dis       Date:  2022-04-19       Impact factor: 7.759
  5 in total

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