Literature DB >> 23252774

Efficient nucleus detector in histopathology images.

J P Vink1, M B Van Leeuwen, C H M Van Deurzen, G De Haan.   

Abstract

In traditional cancer diagnosis, (histo)pathological images of biopsy samples are visually analysed by pathologists. However, this judgment is subjective and leads to variability among pathologists. Digital scanners may enable automated objective assessment, improved quality and reduced throughput time. Nucleus detection is seen as the corner stone for a range of applications in automated assessment of (histo)pathological images. In this paper, we propose an efficient nucleus detector designed with machine learning. We applied colour deconvolution to reconstruct each applied stain. Next, we constructed a large feature set and modified AdaBoost to create two detectors, focused on different characteristics in appearance of nuclei. The proposed modification of AdaBoost enables inclusion of the computational cost of each feature during selection, thus improving the computational efficiency of the resulting detectors. The outputs of the two detectors are merged by a globally optimal active contour algorithm to refine the border of the detected nuclei. With a detection rate of 95% (on average 58 incorrectly found objects per field-of-view) based on 51 field-of-view images of Her2 immunohistochemistry stained breast tissue and a complete analysis in 1 s per field-of-view, our nucleus detector shows good performance and could enable a range of applications in automated assessment of (histo)pathological images.
© 2012 The Authors Journal of Microscopy © 2012 Royal Microscopical Society.

Entities:  

Mesh:

Year:  2012        PMID: 23252774     DOI: 10.1111/jmi.12001

Source DB:  PubMed          Journal:  J Microsc        ISSN: 0022-2720            Impact factor:   1.758


  22 in total

1.  Convolutional neural network initialized active contour model with adaptive ellipse fitting for nuclear segmentation on breast histopathological images.

Authors:  Jun Xu; Lei Gong; Guanhao Wang; Cheng Lu; Hannah Gilmore; Shaoting Zhang; Anant Madabhushi
Journal:  J Med Imaging (Bellingham)       Date:  2019-02-08

2.  Localization of Diagnostically Relevant Regions of Interest in Whole Slide Images: a Comparative Study.

Authors:  Ezgi Mercan; Selim Aksoy; Linda G Shapiro; Donald L Weaver; Tad T Brunyé; Joann G Elmore
Journal:  J Digit Imaging       Date:  2016-08       Impact factor: 4.056

3.  Correlation Filters for Detection of Cellular Nuclei in Histopathology Images.

Authors:  Asif Ahmad; Amina Asif; Nasir Rajpoot; Muhammad Arif; Fayyaz Ul Amir Afsar Minhas
Journal:  J Med Syst       Date:  2017-11-21       Impact factor: 4.460

4.  Efficient and robust cell detection: A structured regression approach.

Authors:  Yuanpu Xie; Fuyong Xing; Xiaoshuang Shi; Xiangfei Kong; Hai Su; Lin Yang
Journal:  Med Image Anal       Date:  2017-07-26       Impact factor: 8.545

5.  Stacked Sparse Autoencoder (SSAE) for Nuclei Detection on Breast Cancer Histopathology Images.

Authors:  Jun Xu; Lei Xiang; Qingshan Liu; Hannah Gilmore; Jianzhong Wu; Jinghai Tang; Anant Madabhushi
Journal:  IEEE Trans Med Imaging       Date:  2015-07-20       Impact factor: 10.048

6.  Automatic cellularity assessment from post-treated breast surgical specimens.

Authors:  Mohammad Peikari; Sherine Salama; Sharon Nofech-Mozes; Anne L Martel
Journal:  Cytometry A       Date:  2017-10-04       Impact factor: 4.355

7.  Fusion of whole and part features for the classification of histopathological image of breast tissue.

Authors:  Chiranjibi Sitaula; Sunil Aryal
Journal:  Health Inf Sci Syst       Date:  2020-11-04

8.  Automatic screening of cervical cells using block image processing.

Authors:  Meng Zhao; Aiguo Wu; Jingjing Song; Xuguo Sun; Na Dong
Journal:  Biomed Eng Online       Date:  2016-02-04       Impact factor: 2.819

9.  Automated image based prominent nucleoli detection.

Authors:  Choon K Yap; Emarene M Kalaw; Malay Singh; Kian T Chong; Danilo M Giron; Chao-Hui Huang; Li Cheng; Yan N Law; Hwee Kuan Lee
Journal:  J Pathol Inform       Date:  2015-06-23

10.  Mitosis Counting in Breast Cancer: Object-Level Interobserver Agreement and Comparison to an Automatic Method.

Authors:  Mitko Veta; Paul J van Diest; Mehdi Jiwa; Shaimaa Al-Janabi; Josien P W Pluim
Journal:  PLoS One       Date:  2016-08-16       Impact factor: 3.240

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.