Literature DB >> 23252597

Temperature dependence of electrochemical DNA charge transport: influence of a mismatch.

Chris H Wohlgamuth1, Marc A McWilliams, Jason D Slinker.   

Abstract

Charge transfer through DNA is of interest as DNA is both the quintessential biomolecule of all living organisms and a self-organizing element in bioelectronic circuits and sensing applications. Here, we report the temperature-dependent properties of DNA charge transport in an electronically relevant arrangement of DNA monolayers on gold under biologically relevant conditions, and we track the effects of incorporating a CA single base pair mismatch. Charge transfer (CT) through double stranded, 17mer monolayers was monitored by following the yield of electrochemical reduction of a Nile blue redox probe conjugated to a modified thymine. Analysis with cyclic voltammetry and square wave voltammetry shows that DNA CT increases significantly with temperature, indicative of more DNA bridges becoming active for transport. The mismatch was found to attenuate DNA CT at lower temperatures, but the effect of the mismatch diminished as temperature was increased. Voltammograms were analyzed to extract the electron transfer rate k(0), the electron transfer coefficient α, and the redox-active surface coverage Γ*. Arrhenius behavior was observed, with activation energies of 100 meV for electron transfer through well-matched DNA. Single CA mismatches increased the activation energy by 60 meV. These results have clear implications for sensing applications and are evaluated with respect to the prominent models of DNA CT.

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Year:  2013        PMID: 23252597     DOI: 10.1021/ac302508f

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


  7 in total

Review 1.  Sensing DNA through DNA Charge Transport.

Authors:  Theodore J Zwang; Edmund C M Tse; Jacqueline K Barton
Journal:  ACS Chem Biol       Date:  2018-06-01       Impact factor: 5.100

2.  Application of Electrochemical Devices to Characterize the Dynamic Actions of Helicases on DNA.

Authors:  Dimithree Kahanda; Kevin T DuPrez; Eduardo Hilario; Marc A McWilliams; Chris H Wohlgamuth; Li Fan; Jason D Slinker
Journal:  Anal Chem       Date:  2018-01-17       Impact factor: 6.986

3.  Intraduplex DNA-mediated electrochemistry of covalently tethered redox-active reporters.

Authors:  Catrina G Pheeney; Jacqueline K Barton
Journal:  J Am Chem Soc       Date:  2013-09-30       Impact factor: 15.419

4.  Accurate zygote-specific discrimination of single-nucleotide polymorphisms using microfluidic electrochemical DNA melting curves.

Authors:  Allen H J Yang; Kuangwen Hsieh; Adriana S Patterson; B Scott Ferguson; Michael Eisenstein; Kevin W Plaxco; H Tom Soh
Journal:  Angew Chem Int Ed Engl       Date:  2014-02-12       Impact factor: 15.336

5.  Understanding Signal and Background in a Thermally Resolved, Single-Branched DNA Assay Using Square Wave Voltammetry.

Authors:  Subramaniam Somasundaram; Mark D Holtan; Christopher J Easley
Journal:  Anal Chem       Date:  2018-02-09       Impact factor: 6.986

6.  Following anticancer drug activity in cell lysates with DNA devices.

Authors:  Dimithree Kahanda; Naveen Singh; David A Boothman; Jason D Slinker
Journal:  Biosens Bioelectron       Date:  2018-07-30       Impact factor: 12.545

7.  High-Precision Electrochemical Measurements of the Guanine-, Mismatch-, and Length-Dependence of Electron Transfer from Electrode-Bound DNA Are Consistent with a Contact-Mediated Mechanism.

Authors:  Philippe Dauphin-Ducharme; Netzahualcóyotl Arroyo-Currás; Kevin W Plaxco
Journal:  J Am Chem Soc       Date:  2019-01-11       Impact factor: 15.419

  7 in total

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